Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CYP46A1Q9Y6A2 Z82202.1-201ENST00000623446 1880 ntBASIC23.28■■□□□ 1.32
CYP46A1Q9Y6A2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CYP46A1Q9Y6A2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CYP46A1Q9Y6A2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CYP46A1Q9Y6A2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CYP46A1Q9Y6A2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 RPS2P52-201ENST00000469610 820 ntBASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CYP46A1Q9Y6A2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 AC083880.1-201ENST00000608266 535 ntBASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC23.26■■□□□ 1.31
CYP46A1Q9Y6A2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CYP46A1Q9Y6A2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.25■■□□□ 1.31
CYP46A1Q9Y6A2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CYP46A1Q9Y6A2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC23.25■■□□□ 1.31
CYP46A1Q9Y6A2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.25■■□□□ 1.31
CYP46A1Q9Y6A2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
CYP46A1Q9Y6A2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CYP46A1Q9Y6A2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CYP46A1Q9Y6A2 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CYP46A1Q9Y6A2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CYP46A1Q9Y6A2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC23.25■■□□□ 1.31
CYP46A1Q9Y6A2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 PNMA6B-201ENST00000538162 1200 ntBASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 AC060766.5-201ENST00000590539 871 ntBASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 AC087289.5-201ENST00000586076 3175 ntBASIC23.24■■□□□ 1.31
CYP46A1Q9Y6A2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 AC090192.1-201ENST00000517740 490 ntBASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 AL032819.2-201ENST00000624543 2162 ntBASIC23.23■■□□□ 1.31
CYP46A1Q9Y6A2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
CYP46A1Q9Y6A2 AC069152.1-201ENST00000438030 544 ntBASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms