Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
HCFC2Q9Y5Z7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 LINC00565-201ENST00000562710 2331 ntBASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 AC092720.2-201ENST00000602388 1665 ntBASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 AP000550.4-202ENST00000639755 178 ntBASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HCFC2Q9Y5Z7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 Z85996.1-201ENST00000494644 937 ntBASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 KRT18P56-201ENST00000507275 550 ntBASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 AC141257.4-201ENST00000634557 245 ntBASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 AC136944.6-201ENST00000634818 245 ntBASIC20.58■□□□□ 0.89
HCFC2Q9Y5Z7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.58■□□□□ 0.88
HCFC2Q9Y5Z7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.58■□□□□ 0.88
HCFC2Q9Y5Z7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HCFC2Q9Y5Z7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.58■□□□□ 0.88
HCFC2Q9Y5Z7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HCFC2Q9Y5Z7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HCFC2Q9Y5Z7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HCFC2Q9Y5Z7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.58■□□□□ 0.88
HCFC2Q9Y5Z7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 AL023803.3-201ENST00000615559 522 ntBASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HCFC2Q9Y5Z7 TMEM179-206ENST00000616017 1645 ntBASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 AC009947.2-201ENST00000444014 672 ntBASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 AC011558.1-201ENST00000623459 338 ntBASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HCFC2Q9Y5Z7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 TSPY17P-201ENST00000450329 467 ntBASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC2Q9Y5Z7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC2Q9Y5Z7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC2Q9Y5Z7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC2Q9Y5Z7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC2Q9Y5Z7 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.54■□□□□ 0.88
HCFC2Q9Y5Z7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms