Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PKP3Q9Y446 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.71■□□□□ 0.75
PKP3Q9Y446 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP3Q9Y446 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.74
PKP3Q9Y446 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PKP3Q9Y446 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PKP3Q9Y446 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PKP3Q9Y446 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 AFG3L1P-217ENST00000557444 2447 ntBASIC19.7■□□□□ 0.74
PKP3Q9Y446 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.7■□□□□ 0.74
PKP3Q9Y446 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.7■□□□□ 0.74
PKP3Q9Y446 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.7■□□□□ 0.74
PKP3Q9Y446 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 MIR4651-201ENST00000582622 73 ntBASIC19.7■□□□□ 0.74
PKP3Q9Y446 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PKP3Q9Y446 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PKP3Q9Y446 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PKP3Q9Y446 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP3Q9Y446 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.7■□□□□ 0.74
PKP3Q9Y446 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PKP3Q9Y446 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PKP3Q9Y446 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PKP3Q9Y446 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PKP3Q9Y446 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP3Q9Y446 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PKP3Q9Y446 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PKP3Q9Y446 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.69■□□□□ 0.74
PKP3Q9Y446 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PKP3Q9Y446 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP3Q9Y446 POU5F1P3-201ENST00000428824 1078 ntBASIC19.69■□□□□ 0.74
PKP3Q9Y446 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.69■□□□□ 0.74
PKP3Q9Y446 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PKP3Q9Y446 AC006058.3-201ENST00000606217 1069 ntBASIC19.69■□□□□ 0.74
PKP3Q9Y446 AC069544.1-201ENST00000609399 999 ntBASIC19.69■□□□□ 0.74
PKP3Q9Y446 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PKP3Q9Y446 AP006587.1-201ENST00000534129 1502 ntBASIC19.69■□□□□ 0.74
PKP3Q9Y446 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.69■□□□□ 0.74
PKP3Q9Y446 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP3Q9Y446 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP3Q9Y446 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP3Q9Y446 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PKP3Q9Y446 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PKP3Q9Y446 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP3Q9Y446 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PKP3Q9Y446 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PKP3Q9Y446 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PKP3Q9Y446 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.68■□□□□ 0.74
PKP3Q9Y446 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PKP3Q9Y446 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.68■□□□□ 0.74
PKP3Q9Y446 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PKP3Q9Y446 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP3Q9Y446 FAM201B-201ENST00000458407 597 ntBASIC19.68■□□□□ 0.74
PKP3Q9Y446 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.68■□□□□ 0.74
PKP3Q9Y446 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PKP3Q9Y446 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PKP3Q9Y446 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.68■□□□□ 0.74
PKP3Q9Y446 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP3Q9Y446 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PKP3Q9Y446 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP3Q9Y446 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PKP3Q9Y446 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP3Q9Y446 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP3Q9Y446 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP3Q9Y446 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP3Q9Y446 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP3Q9Y446 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP3Q9Y446 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PKP3Q9Y446 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP3Q9Y446 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP3Q9Y446 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.67■□□□□ 0.74
PKP3Q9Y446 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms