Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 SLC7A5P2-201ENST00000553010 536 ntBASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 AL355001.2-201ENST00000620617 1191 ntBASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RCL1Q9Y2P8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 AC104581.1-202ENST00000635932 2618 ntBASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 AL358852.1-201ENST00000623174 1268 ntBASIC16.02■□□□□ 0.16
RCL1Q9Y2P8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
RCL1Q9Y2P8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 BCL2-203ENST00000589955 5011 ntBASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RCL1Q9Y2P8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16■□□□□ 0.15
RCL1Q9Y2P8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCL1Q9Y2P8 AC009113.1-201ENST00000570267 2443 ntBASIC16■□□□□ 0.15
RCL1Q9Y2P8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCL1Q9Y2P8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16■□□□□ 0.15
RCL1Q9Y2P8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RCL1Q9Y2P8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCL1Q9Y2P8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCL1Q9Y2P8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCL1Q9Y2P8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16■□□□□ 0.15
RCL1Q9Y2P8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16■□□□□ 0.15
RCL1Q9Y2P8 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RCL1Q9Y2P8 NT5C3AP1-201ENST00000394500 1012 ntBASIC16■□□□□ 0.15
RCL1Q9Y2P8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16■□□□□ 0.15
RCL1Q9Y2P8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16■□□□□ 0.15
RCL1Q9Y2P8 AC243732.1-201ENST00000612648 864 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms