Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.8■□□□□ 0.44
HMG20AQ9NP66 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 AC142381.2-201ENST00000566120 298 ntBASIC17.79■□□□□ 0.44
HMG20AQ9NP66 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
HMG20AQ9NP66 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 AL691432.2-201ENST00000607222 2038 ntBASIC17.78■□□□□ 0.44
HMG20AQ9NP66 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 AL354811.1-201ENST00000610286 706 ntBASIC17.78■□□□□ 0.44
HMG20AQ9NP66 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
HMG20AQ9NP66 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HMG20AQ9NP66 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMG20AQ9NP66 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HMG20AQ9NP66 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMG20AQ9NP66 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.77■□□□□ 0.43
HMG20AQ9NP66 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HMG20AQ9NP66 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMG20AQ9NP66 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HMG20AQ9NP66 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.76■□□□□ 0.43
HMG20AQ9NP66 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms