Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 MIR663A-201ENST00000385250 93 ntBASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 AC026185.1-201ENST00000445748 174 ntBASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRTM1Q9HBL6 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 AC116351.2-201ENST00000606540 1585 ntBASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.85■□□□□ 0.61
LRTM1Q9HBL6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRTM1Q9HBL6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
LRTM1Q9HBL6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
LRTM1Q9HBL6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRTM1Q9HBL6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LRTM1Q9HBL6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.83■□□□□ 0.61
LRTM1Q9HBL6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRTM1Q9HBL6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRTM1Q9HBL6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRTM1Q9HBL6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.83■□□□□ 0.6
LRTM1Q9HBL6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
LRTM1Q9HBL6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.83■□□□□ 0.6
LRTM1Q9HBL6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRTM1Q9HBL6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRTM1Q9HBL6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRTM1Q9HBL6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRTM1Q9HBL6 AC120498.9-201ENST00000339021 3867 ntBASIC18.83■□□□□ 0.6
LRTM1Q9HBL6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRTM1Q9HBL6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.83■□□□□ 0.6
LRTM1Q9HBL6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRTM1Q9HBL6 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 AL390719.1-204ENST00000412397 1219 ntBASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 RAP2CP1-201ENST00000605103 478 ntBASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 TNXA-203ENST00000507684 2038 ntBASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRTM1Q9HBL6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms