Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SP110Q9HB58 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.11■□□□□ 0.81
SP110Q9HB58 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP110Q9HB58 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SP110Q9HB58 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP110Q9HB58 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SP110Q9HB58 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.11■□□□□ 0.81
SP110Q9HB58 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP110Q9HB58 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SP110Q9HB58 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.11■□□□□ 0.81
SP110Q9HB58 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SP110Q9HB58 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SP110Q9HB58 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP110Q9HB58 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SP110Q9HB58 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SP110Q9HB58 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.11■□□□□ 0.81
SP110Q9HB58 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
SP110Q9HB58 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.11■□□□□ 0.81
SP110Q9HB58 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SP110Q9HB58 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SP110Q9HB58 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP110Q9HB58 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SP110Q9HB58 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SP110Q9HB58 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP110Q9HB58 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SP110Q9HB58 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP110Q9HB58 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SP110Q9HB58 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP110Q9HB58 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SP110Q9HB58 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SP110Q9HB58 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SP110Q9HB58 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SP110Q9HB58 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.1■□□□□ 0.81
SP110Q9HB58 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SP110Q9HB58 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SP110Q9HB58 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SP110Q9HB58 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SP110Q9HB58 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SP110Q9HB58 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SP110Q9HB58 ABHD17AP1-201ENST00000358206 933 ntBASIC20.1■□□□□ 0.81
SP110Q9HB58 AC239809.2-201ENST00000415381 517 ntBASIC20.1■□□□□ 0.81
SP110Q9HB58 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.1■□□□□ 0.81
SP110Q9HB58 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.1■□□□□ 0.81
SP110Q9HB58 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.1■□□□□ 0.81
SP110Q9HB58 AL023875.1-201ENST00000640777 796 ntBASIC20.1■□□□□ 0.81
SP110Q9HB58 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SP110Q9HB58 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.1■□□□□ 0.81
SP110Q9HB58 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SP110Q9HB58 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SP110Q9HB58 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.1■□□□□ 0.81
SP110Q9HB58 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.1■□□□□ 0.81
SP110Q9HB58 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SP110Q9HB58 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SP110Q9HB58 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SP110Q9HB58 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.09■□□□□ 0.81
SP110Q9HB58 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.09■□□□□ 0.81
SP110Q9HB58 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SP110Q9HB58 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.09■□□□□ 0.81
SP110Q9HB58 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SP110Q9HB58 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SP110Q9HB58 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SP110Q9HB58 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.09■□□□□ 0.81
SP110Q9HB58 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SP110Q9HB58 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SP110Q9HB58 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.09■□□□□ 0.81
SP110Q9HB58 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SP110Q9HB58 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.09■□□□□ 0.81
SP110Q9HB58 AFG3L1P-217ENST00000557444 2447 ntBASIC20.09■□□□□ 0.81
SP110Q9HB58 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SP110Q9HB58 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SP110Q9HB58 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SP110Q9HB58 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SP110Q9HB58 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SP110Q9HB58 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SP110Q9HB58 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SP110Q9HB58 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SP110Q9HB58 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SP110Q9HB58 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SP110Q9HB58 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SP110Q9HB58 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.08■□□□□ 0.81
SP110Q9HB58 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SP110Q9HB58 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SP110Q9HB58 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.08■□□□□ 0.81
SP110Q9HB58 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SP110Q9HB58 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.08■□□□□ 0.81
SP110Q9HB58 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.08■□□□□ 0.81
SP110Q9HB58 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.08■□□□□ 0.81
SP110Q9HB58 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SP110Q9HB58 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SP110Q9HB58 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.08■□□□□ 0.81
SP110Q9HB58 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SP110Q9HB58 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SP110Q9HB58 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SP110Q9HB58 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SP110Q9HB58 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SP110Q9HB58 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SP110Q9HB58 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SP110Q9HB58 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.07■□□□□ 0.8
SP110Q9HB58 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SP110Q9HB58 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms