Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
VPS16Q9H269 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS16Q9H269 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS16Q9H269 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
VPS16Q9H269 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS16Q9H269 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
VPS16Q9H269 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
VPS16Q9H269 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS16Q9H269 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
VPS16Q9H269 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
VPS16Q9H269 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS16Q9H269 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.54■■□□□ 1.04
VPS16Q9H269 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
VPS16Q9H269 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.54■■□□□ 1.04
VPS16Q9H269 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
VPS16Q9H269 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS16Q9H269 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS16Q9H269 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS16Q9H269 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.53■■□□□ 1.04
VPS16Q9H269 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS16Q9H269 MIR935-201ENST00000401179 91 ntBASIC21.53■■□□□ 1.04
VPS16Q9H269 LSM12P1-201ENST00000411836 588 ntBASIC21.53■■□□□ 1.04
VPS16Q9H269 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.53■■□□□ 1.04
VPS16Q9H269 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.53■■□□□ 1.04
VPS16Q9H269 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
VPS16Q9H269 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.53■■□□□ 1.04
VPS16Q9H269 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
VPS16Q9H269 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.53■■□□□ 1.04
VPS16Q9H269 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
VPS16Q9H269 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
VPS16Q9H269 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS16Q9H269 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS16Q9H269 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.52■■□□□ 1.04
VPS16Q9H269 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS16Q9H269 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
VPS16Q9H269 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.52■■□□□ 1.04
VPS16Q9H269 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS16Q9H269 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS16Q9H269 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS16Q9H269 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.52■■□□□ 1.04
VPS16Q9H269 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS16Q9H269 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS16Q9H269 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.52■■□□□ 1.04
VPS16Q9H269 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS16Q9H269 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS16Q9H269 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
VPS16Q9H269 AC018553.1-201ENST00000616682 1458 ntBASIC21.52■■□□□ 1.03
VPS16Q9H269 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VPS16Q9H269 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS16Q9H269 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS16Q9H269 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
VPS16Q9H269 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS16Q9H269 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VPS16Q9H269 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.51■■□□□ 1.03
VPS16Q9H269 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VPS16Q9H269 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
VPS16Q9H269 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS16Q9H269 GPX1P1-201ENST00000388829 606 ntBASIC21.51■■□□□ 1.03
VPS16Q9H269 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
VPS16Q9H269 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.51■■□□□ 1.03
VPS16Q9H269 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VPS16Q9H269 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.51■■□□□ 1.03
VPS16Q9H269 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.51■■□□□ 1.03
VPS16Q9H269 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.51■■□□□ 1.03
VPS16Q9H269 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.51■■□□□ 1.03
VPS16Q9H269 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
VPS16Q9H269 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS16Q9H269 AC093503.3-201ENST00000624917 2352 ntBASIC21.51■■□□□ 1.03
VPS16Q9H269 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
VPS16Q9H269 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
VPS16Q9H269 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms