Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CRNKL1Q9BZJ0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CRNKL1Q9BZJ0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CRNKL1Q9BZJ0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CRNKL1Q9BZJ0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.38■■□□□ 1.33
CRNKL1Q9BZJ0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CRNKL1Q9BZJ0 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.38■■□□□ 1.33
CRNKL1Q9BZJ0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC23.38■■□□□ 1.33
CRNKL1Q9BZJ0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.38■■□□□ 1.33
CRNKL1Q9BZJ0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CRNKL1Q9BZJ0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
CRNKL1Q9BZJ0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 KRT8P8-201ENST00000434750 1448 ntBASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 REXO1L12P-201ENST00000622156 912 ntBASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 AL031985.4-201ENST00000642138 673 ntBASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CRNKL1Q9BZJ0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 REXO1L10P-201ENST00000615707 1290 ntBASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CRNKL1Q9BZJ0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CRNKL1Q9BZJ0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 AC116562.2-201ENST00000507042 360 ntBASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 AC026271.3-201ENST00000571884 352 ntBASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 HLA-A-209ENST00000638375 975 ntBASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CRNKL1Q9BZJ0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.33■■□□□ 1.33
CRNKL1Q9BZJ0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
CRNKL1Q9BZJ0 TCF3P1-201ENST00000423021 1937 ntBASIC23.33■■□□□ 1.33
CRNKL1Q9BZJ0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
CRNKL1Q9BZJ0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.33■■□□□ 1.33
CRNKL1Q9BZJ0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms