Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC6.69□□□□□ -1.34
KRTAP4-3Q9BYR4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AFG3L1P-217ENST00000557444 2447 ntBASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 MESTP1-201ENST00000404287 994 ntBASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 KRT18P57-201ENST00000443599 1254 ntBASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AC008040.2-201ENST00000461049 708 ntBASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AC011506.1-201ENST00000474329 610 ntBASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 MIR4785-201ENST00000585005 73 ntBASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 KRT17P2-201ENST00000300992 1314 ntBASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 PHGDH-210ENST00000641115 1638 ntBASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 GOLGA6L3-201ENST00000507199 1679 ntBASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC6.68□□□□□ -1.34
KRTAP4-3Q9BYR4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC6.67□□□□□ -1.34
KRTAP4-3Q9BYR4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms