Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CLCC1Q96S66 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.49■□□□□ 0.23
CLCC1Q96S66 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCC1Q96S66 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CLCC1Q96S66 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CLCC1Q96S66 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCC1Q96S66 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCC1Q96S66 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.48■□□□□ 0.23
CLCC1Q96S66 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCC1Q96S66 AL162430.1-201ENST00000480705 870 ntBASIC16.48■□□□□ 0.23
CLCC1Q96S66 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCC1Q96S66 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CLCC1Q96S66 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCC1Q96S66 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.48■□□□□ 0.23
CLCC1Q96S66 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCC1Q96S66 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCC1Q96S66 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.48■□□□□ 0.23
CLCC1Q96S66 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.48■□□□□ 0.23
CLCC1Q96S66 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCC1Q96S66 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCC1Q96S66 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCC1Q96S66 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCC1Q96S66 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCC1Q96S66 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLCC1Q96S66 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLCC1Q96S66 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.47■□□□□ 0.23
CLCC1Q96S66 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCC1Q96S66 AL512408.1-201ENST00000569378 2000 ntBASIC16.47■□□□□ 0.23
CLCC1Q96S66 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.47■□□□□ 0.23
CLCC1Q96S66 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCC1Q96S66 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCC1Q96S66 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 MYCNOS-205ENST00000641950 531 ntBASIC16.47■□□□□ 0.23
CLCC1Q96S66 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
CLCC1Q96S66 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.47■□□□□ 0.23
CLCC1Q96S66 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCC1Q96S66 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCC1Q96S66 AC007613.1-201ENST00000572811 2597 ntBASIC16.46■□□□□ 0.23
CLCC1Q96S66 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CLCC1Q96S66 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CLCC1Q96S66 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCC1Q96S66 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCC1Q96S66 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCC1Q96S66 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.46■□□□□ 0.23
CLCC1Q96S66 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCC1Q96S66 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCC1Q96S66 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.46■□□□□ 0.23
CLCC1Q96S66 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCC1Q96S66 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCC1Q96S66 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCC1Q96S66 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCC1Q96S66 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CLCC1Q96S66 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLCC1Q96S66 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.46■□□□□ 0.22
CLCC1Q96S66 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCC1Q96S66 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
CLCC1Q96S66 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCC1Q96S66 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCC1Q96S66 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCC1Q96S66 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCC1Q96S66 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCC1Q96S66 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCC1Q96S66 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLCC1Q96S66 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCC1Q96S66 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCC1Q96S66 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCC1Q96S66 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CLCC1Q96S66 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.45■□□□□ 0.22
CLCC1Q96S66 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.45■□□□□ 0.22
CLCC1Q96S66 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms