Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 POU5F1P4-201ENST00000413175 1085 ntBASIC14.8□□□□□ -0.04
AP1S3Q96PC3 AC245052.3-201ENST00000450182 901 ntBASIC14.8□□□□□ -0.04
AP1S3Q96PC3 AC027682.1-201ENST00000562846 899 ntBASIC14.8□□□□□ -0.04
AP1S3Q96PC3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 TSPY26P-201ENST00000476365 1326 ntBASIC14.8□□□□□ -0.04
AP1S3Q96PC3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.8□□□□□ -0.04
AP1S3Q96PC3 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 UNC93B3-201ENST00000308076 687 ntBASIC14.79□□□□□ -0.04
AP1S3Q96PC3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 AL136162.1-201ENST00000607711 1078 ntBASIC14.79□□□□□ -0.04
AP1S3Q96PC3 AC135279.3-201ENST00000610945 1311 ntBASIC14.79□□□□□ -0.04
AP1S3Q96PC3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
AP1S3Q96PC3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 AC024257.2-201ENST00000549699 147 ntBASIC14.78□□□□□ -0.04
AP1S3Q96PC3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 AC008764.7-201ENST00000593779 1081 ntBASIC14.78□□□□□ -0.04
AP1S3Q96PC3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AP1S3Q96PC3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S3Q96PC3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S3Q96PC3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S3Q96PC3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S3Q96PC3 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.77□□□□□ -0.04
AP1S3Q96PC3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S3Q96PC3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.77□□□□□ -0.04
AP1S3Q96PC3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.77□□□□□ -0.04
AP1S3Q96PC3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.77□□□□□ -0.04
AP1S3Q96PC3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S3Q96PC3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AP1S3Q96PC3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AP1S3Q96PC3 AP000974.1-201ENST00000623909 2387 ntBASIC14.77□□□□□ -0.05
AP1S3Q96PC3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms