Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTP4Q96DX8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.03■□□□□ 0.8
RTP4Q96DX8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTP4Q96DX8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
RTP4Q96DX8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTP4Q96DX8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.02■□□□□ 0.8
RTP4Q96DX8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RTP4Q96DX8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RTP4Q96DX8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTP4Q96DX8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTP4Q96DX8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.02■□□□□ 0.79
RTP4Q96DX8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RTP4Q96DX8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.02■□□□□ 0.79
RTP4Q96DX8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.02■□□□□ 0.79
RTP4Q96DX8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTP4Q96DX8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTP4Q96DX8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.01■□□□□ 0.79
RTP4Q96DX8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RTP4Q96DX8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTP4Q96DX8 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
RTP4Q96DX8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTP4Q96DX8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTP4Q96DX8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RTP4Q96DX8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.01■□□□□ 0.79
RTP4Q96DX8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.01■□□□□ 0.79
RTP4Q96DX8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.01■□□□□ 0.79
RTP4Q96DX8 AC006557.6-201ENST00000623071 864 ntBASIC20.01■□□□□ 0.79
RTP4Q96DX8 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTP4Q96DX8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20■□□□□ 0.79
RTP4Q96DX8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTP4Q96DX8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTP4Q96DX8 TNXA-203ENST00000507684 2038 ntBASIC20■□□□□ 0.79
RTP4Q96DX8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RTP4Q96DX8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20■□□□□ 0.79
RTP4Q96DX8 AC124283.5-201ENST00000624661 1809 ntBASIC20■□□□□ 0.79
RTP4Q96DX8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20■□□□□ 0.79
RTP4Q96DX8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RTP4Q96DX8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20■□□□□ 0.79
RTP4Q96DX8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20■□□□□ 0.79
RTP4Q96DX8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTP4Q96DX8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20■□□□□ 0.79
RTP4Q96DX8 RPS2P52-201ENST00000469610 820 ntBASIC20■□□□□ 0.79
RTP4Q96DX8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTP4Q96DX8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RTP4Q96DX8 AC066615.1-201ENST00000640911 628 ntBASIC20■□□□□ 0.79
RTP4Q96DX8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTP4Q96DX8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RTP4Q96DX8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RTP4Q96DX8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RTP4Q96DX8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20■□□□□ 0.79
RTP4Q96DX8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTP4Q96DX8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTP4Q96DX8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTP4Q96DX8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.99■□□□□ 0.79
RTP4Q96DX8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTP4Q96DX8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RTP4Q96DX8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTP4Q96DX8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTP4Q96DX8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
RTP4Q96DX8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTP4Q96DX8 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.99■□□□□ 0.79
RTP4Q96DX8 RNA5SP413-201ENST00000516373 109 ntBASIC19.99■□□□□ 0.79
RTP4Q96DX8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.99■□□□□ 0.79
RTP4Q96DX8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.99■□□□□ 0.79
RTP4Q96DX8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTP4Q96DX8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RTP4Q96DX8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTP4Q96DX8 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTP4Q96DX8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTP4Q96DX8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTP4Q96DX8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTP4Q96DX8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTP4Q96DX8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTP4Q96DX8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTP4Q96DX8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTP4Q96DX8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTP4Q96DX8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 AC097658.1-201ENST00000475555 843 ntBASIC19.98■□□□□ 0.79
RTP4Q96DX8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTP4Q96DX8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.98■□□□□ 0.79
RTP4Q96DX8 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTP4Q96DX8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTP4Q96DX8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTP4Q96DX8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.97■□□□□ 0.79
RTP4Q96DX8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RTP4Q96DX8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms