Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP9XQ93008 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP9XQ93008 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP9XQ93008 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.17■□□□□ 0.34
USP9XQ93008 AL031008.1-201ENST00000619963 541 ntBASIC17.17■□□□□ 0.34
USP9XQ93008 AL121603.2-201ENST00000557373 2117 ntBASIC17.17■□□□□ 0.34
USP9XQ93008 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.16■□□□□ 0.34
USP9XQ93008 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP9XQ93008 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
USP9XQ93008 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
USP9XQ93008 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.16■□□□□ 0.34
USP9XQ93008 KRT8P20-201ENST00000423953 1409 ntBASIC17.16■□□□□ 0.34
USP9XQ93008 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP9XQ93008 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP9XQ93008 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.16■□□□□ 0.34
USP9XQ93008 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
USP9XQ93008 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP9XQ93008 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP9XQ93008 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP9XQ93008 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.16■□□□□ 0.34
USP9XQ93008 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
USP9XQ93008 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP9XQ93008 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.16■□□□□ 0.34
USP9XQ93008 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.16■□□□□ 0.34
USP9XQ93008 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP9XQ93008 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP9XQ93008 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.16■□□□□ 0.34
USP9XQ93008 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP9XQ93008 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP9XQ93008 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP9XQ93008 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
USP9XQ93008 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.15■□□□□ 0.34
USP9XQ93008 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP9XQ93008 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP9XQ93008 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.15■□□□□ 0.34
USP9XQ93008 GCSHP2-201ENST00000560971 527 ntBASIC17.15■□□□□ 0.34
USP9XQ93008 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.15■□□□□ 0.34
USP9XQ93008 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.15■□□□□ 0.34
USP9XQ93008 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.15■□□□□ 0.34
USP9XQ93008 AC116351.2-201ENST00000606540 1585 ntBASIC17.15■□□□□ 0.34
USP9XQ93008 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP9XQ93008 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.15■□□□□ 0.34
USP9XQ93008 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP9XQ93008 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
USP9XQ93008 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
USP9XQ93008 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.15■□□□□ 0.34
USP9XQ93008 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.15■□□□□ 0.34
USP9XQ93008 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP9XQ93008 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
USP9XQ93008 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.15■□□□□ 0.34
USP9XQ93008 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.15■□□□□ 0.34
USP9XQ93008 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
USP9XQ93008 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.15■□□□□ 0.34
USP9XQ93008 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
USP9XQ93008 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
USP9XQ93008 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.15■□□□□ 0.34
USP9XQ93008 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
USP9XQ93008 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
USP9XQ93008 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.14■□□□□ 0.33
USP9XQ93008 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
USP9XQ93008 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.14■□□□□ 0.33
USP9XQ93008 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.14■□□□□ 0.33
USP9XQ93008 AL662844.1-201ENST00000546340 181 ntBASIC17.14■□□□□ 0.33
USP9XQ93008 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.14■□□□□ 0.33
USP9XQ93008 HLA-A-209ENST00000638375 975 ntBASIC17.14■□□□□ 0.33
USP9XQ93008 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.14■□□□□ 0.33
USP9XQ93008 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
USP9XQ93008 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
USP9XQ93008 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
USP9XQ93008 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.14■□□□□ 0.33
USP9XQ93008 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
USP9XQ93008 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
USP9XQ93008 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP9XQ93008 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP9XQ93008 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP9XQ93008 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
USP9XQ93008 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP9XQ93008 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP9XQ93008 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.13■□□□□ 0.33
USP9XQ93008 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP9XQ93008 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.13■□□□□ 0.33
USP9XQ93008 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.13■□□□□ 0.33
USP9XQ93008 AC244107.1-201ENST00000442033 332 ntBASIC17.13■□□□□ 0.33
USP9XQ93008 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.13■□□□□ 0.33
USP9XQ93008 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.13■□□□□ 0.33
USP9XQ93008 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms