Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.08■□□□□ 0.48
CNOT9Q92600 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.08■□□□□ 0.48
CNOT9Q92600 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT9Q92600 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.08■□□□□ 0.48
CNOT9Q92600 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.08■□□□□ 0.48
CNOT9Q92600 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.08■□□□□ 0.48
CNOT9Q92600 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT9Q92600 AC133041.1-202ENST00000642053 222 ntBASIC18.08■□□□□ 0.48
CNOT9Q92600 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.08■□□□□ 0.48
CNOT9Q92600 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT9Q92600 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CNOT9Q92600 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT9Q92600 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT9Q92600 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT9Q92600 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.08■□□□□ 0.48
CNOT9Q92600 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CNOT9Q92600 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT9Q92600 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CNOT9Q92600 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
CNOT9Q92600 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CNOT9Q92600 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.07■□□□□ 0.48
CNOT9Q92600 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CNOT9Q92600 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CNOT9Q92600 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.07■□□□□ 0.48
CNOT9Q92600 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT9Q92600 RPS2P52-201ENST00000469610 820 ntBASIC18.07■□□□□ 0.48
CNOT9Q92600 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.07■□□□□ 0.48
CNOT9Q92600 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CNOT9Q92600 PNMA6B-201ENST00000538162 1200 ntBASIC18.07■□□□□ 0.48
CNOT9Q92600 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.07■□□□□ 0.48
CNOT9Q92600 AC060766.5-201ENST00000590539 871 ntBASIC18.07■□□□□ 0.48
CNOT9Q92600 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT9Q92600 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CNOT9Q92600 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CNOT9Q92600 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.07■□□□□ 0.48
CNOT9Q92600 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT9Q92600 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.07■□□□□ 0.48
CNOT9Q92600 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.07■□□□□ 0.48
CNOT9Q92600 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CNOT9Q92600 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.07■□□□□ 0.48
CNOT9Q92600 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CNOT9Q92600 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CNOT9Q92600 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CNOT9Q92600 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CNOT9Q92600 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.06■□□□□ 0.48
CNOT9Q92600 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.06■□□□□ 0.48
CNOT9Q92600 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT9Q92600 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT9Q92600 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CNOT9Q92600 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT9Q92600 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT9Q92600 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT9Q92600 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT9Q92600 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.06■□□□□ 0.48
CNOT9Q92600 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.06■□□□□ 0.48
CNOT9Q92600 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT9Q92600 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CNOT9Q92600 HLA-L-209ENST00000420110 1011 ntBASIC18.06■□□□□ 0.48
CNOT9Q92600 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.06■□□□□ 0.48
CNOT9Q92600 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.06■□□□□ 0.48
CNOT9Q92600 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.06■□□□□ 0.48
CNOT9Q92600 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.06■□□□□ 0.48
CNOT9Q92600 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.06■□□□□ 0.48
CNOT9Q92600 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CNOT9Q92600 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT9Q92600 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT9Q92600 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT9Q92600 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CNOT9Q92600 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.06■□□□□ 0.48
CNOT9Q92600 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.06■□□□□ 0.48
CNOT9Q92600 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT9Q92600 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.05■□□□□ 0.48
CNOT9Q92600 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CNOT9Q92600 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CNOT9Q92600 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT9Q92600 TFP1-202ENST00000475455 1573 ntBASIC18.05■□□□□ 0.48
CNOT9Q92600 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.05■□□□□ 0.48
CNOT9Q92600 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT9Q92600 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT9Q92600 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT9Q92600 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CNOT9Q92600 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CNOT9Q92600 AL355802.2-201ENST00000402069 882 ntBASIC18.05■□□□□ 0.48
CNOT9Q92600 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.05■□□□□ 0.48
CNOT9Q92600 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.05■□□□□ 0.48
CNOT9Q92600 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.05■□□□□ 0.48
CNOT9Q92600 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.05■□□□□ 0.48
CNOT9Q92600 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT9Q92600 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.05■□□□□ 0.48
CNOT9Q92600 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.05■□□□□ 0.48
CNOT9Q92600 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CNOT9Q92600 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT9Q92600 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.05■□□□□ 0.48
CNOT9Q92600 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CNOT9Q92600 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.05■□□□□ 0.48
CNOT9Q92600 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.04■□□□□ 0.48
CNOT9Q92600 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT9Q92600 AC093484.2-201ENST00000580996 2166 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms