Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 AC008687.6-201ENST00000596318 630 ntBASIC19.15■□□□□ 0.66
ATL1Q8WXF7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATL1Q8WXF7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.14■□□□□ 0.66
ATL1Q8WXF7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 UNC93B4-201ENST00000505679 747 ntBASIC19.14■□□□□ 0.65
ATL1Q8WXF7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.14■□□□□ 0.65
ATL1Q8WXF7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 UNC93B5-201ENST00000530315 699 ntBASIC19.13■□□□□ 0.65
ATL1Q8WXF7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ATL1Q8WXF7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 AL121829.2-201ENST00000620908 328 ntBASIC19.12■□□□□ 0.65
ATL1Q8WXF7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ATL1Q8WXF7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms