Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 AC093503.3-201ENST00000624917 2352 ntBASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 CDCA4P2-201ENST00000441182 718 ntBASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 OR10C1-204ENST00000622521 1039 ntBASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RTN4IP1Q8WWV3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 MCRIP2P1-201ENST00000394346 511 ntBASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 AC026185.1-201ENST00000445748 174 ntBASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 AL356652.1-201ENST00000615962 565 ntBASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RTN4IP1Q8WWV3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RTN4IP1Q8WWV3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 AC009237.14-201ENST00000609975 1594 ntBASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 RAP2CP1-201ENST00000605103 478 ntBASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 AC092666.2-201ENST00000613287 246 ntBASIC16.47■□□□□ 0.23
RTN4IP1Q8WWV3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms