Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC116351.2-201ENST00000606540 1585 ntBASIC19.87■□□□□ 0.77
PTCD2Q8WV60 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.86■□□□□ 0.77
PTCD2Q8WV60 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 AL158047.1-201ENST00000445918 881 ntBASIC19.85■□□□□ 0.77
PTCD2Q8WV60 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 AC069544.1-201ENST00000609399 999 ntBASIC19.85■□□□□ 0.77
PTCD2Q8WV60 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PTCD2Q8WV60 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 AC018553.1-201ENST00000616682 1458 ntBASIC19.84■□□□□ 0.77
PTCD2Q8WV60 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.84■□□□□ 0.77
PTCD2Q8WV60 AC124283.5-201ENST00000624661 1809 ntBASIC19.83■□□□□ 0.77
PTCD2Q8WV60 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 AC007952.6-201ENST00000573168 2673 ntBASIC19.83■□□□□ 0.77
PTCD2Q8WV60 AC003957.1-201ENST00000625108 2673 ntBASIC19.83■□□□□ 0.77
PTCD2Q8WV60 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 POM121L13P-201ENST00000422362 380 ntBASIC19.83■□□□□ 0.77
PTCD2Q8WV60 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 AC142381.4-202ENST00000563973 229 ntBASIC19.83■□□□□ 0.77
PTCD2Q8WV60 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC19.83■□□□□ 0.77
PTCD2Q8WV60 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
PTCD2Q8WV60 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTCD2Q8WV60 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PTCD2Q8WV60 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.83■□□□□ 0.76
PTCD2Q8WV60 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.83■□□□□ 0.76
PTCD2Q8WV60 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms