Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF139Q8WU17 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF139Q8WU17 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF139Q8WU17 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
RNF139Q8WU17 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF139Q8WU17 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF139Q8WU17 TFP1-202ENST00000475455 1573 ntBASIC20.63■□□□□ 0.89
RNF139Q8WU17 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
RNF139Q8WU17 AP006587.1-201ENST00000534129 1502 ntBASIC20.63■□□□□ 0.89
RNF139Q8WU17 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
RNF139Q8WU17 SLC25A24-204ENST00000569674 2357 ntBASIC20.63■□□□□ 0.89
RNF139Q8WU17 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF139Q8WU17 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF139Q8WU17 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
RNF139Q8WU17 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF139Q8WU17 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF139Q8WU17 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF139Q8WU17 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF139Q8WU17 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF139Q8WU17 AC004264.1-201ENST00000608354 794 ntBASIC20.62■□□□□ 0.89
RNF139Q8WU17 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF139Q8WU17 AC066615.1-201ENST00000640911 628 ntBASIC20.62■□□□□ 0.89
RNF139Q8WU17 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF139Q8WU17 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF139Q8WU17 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RNF139Q8WU17 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF139Q8WU17 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RNF139Q8WU17 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF139Q8WU17 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF139Q8WU17 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF139Q8WU17 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF139Q8WU17 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF139Q8WU17 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF139Q8WU17 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF139Q8WU17 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF139Q8WU17 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF139Q8WU17 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF139Q8WU17 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF139Q8WU17 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RNF139Q8WU17 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF139Q8WU17 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
RNF139Q8WU17 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF139Q8WU17 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.6■□□□□ 0.89
RNF139Q8WU17 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RNF139Q8WU17 AP001271.2-201ENST00000624018 1556 ntBASIC20.6■□□□□ 0.89
RNF139Q8WU17 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF139Q8WU17 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF139Q8WU17 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF139Q8WU17 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF139Q8WU17 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF139Q8WU17 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF139Q8WU17 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.6■□□□□ 0.89
RNF139Q8WU17 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF139Q8WU17 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF139Q8WU17 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF139Q8WU17 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
RNF139Q8WU17 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF139Q8WU17 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF139Q8WU17 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF139Q8WU17 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RNF139Q8WU17 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.6■□□□□ 0.89
RNF139Q8WU17 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RNF139Q8WU17 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RNF139Q8WU17 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF139Q8WU17 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF139Q8WU17 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF139Q8WU17 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF139Q8WU17 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF139Q8WU17 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.59■□□□□ 0.89
RNF139Q8WU17 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RNF139Q8WU17 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF139Q8WU17 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RNF139Q8WU17 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.59■□□□□ 0.89
RNF139Q8WU17 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF139Q8WU17 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF139Q8WU17 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF139Q8WU17 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF139Q8WU17 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF139Q8WU17 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF139Q8WU17 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF139Q8WU17 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF139Q8WU17 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.58■□□□□ 0.89
RNF139Q8WU17 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
RNF139Q8WU17 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF139Q8WU17 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF139Q8WU17 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RNF139Q8WU17 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms