Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SMIM20Q8N5G0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 AC022211.2-201ENST00000585075 2527 ntBASIC12.27□□□□□ -0.45
SMIM20Q8N5G0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 LINC02228-204ENST00000642115 2962 ntBASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SMIM20Q8N5G0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 AC104581.4-201ENST00000623126 3052 ntBASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SMIM20Q8N5G0 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SMIM20Q8N5G0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms