Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 AL109923.1-201ENST00000618799 583 ntBASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.21■□□□□ 0.51
DEPDC4Q8N2C3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
DEPDC4Q8N2C3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 SLC7A5P2-201ENST00000553010 536 ntBASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 FAM21FP-204ENST00000608637 956 ntBASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 AL121832.2-201ENST00000610979 668 ntBASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DEPDC4Q8N2C3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 NCF1B-203ENST00000435988 1254 ntBASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DEPDC4Q8N2C3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 AC008694.1-202ENST00000636953 945 ntBASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEPDC4Q8N2C3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEPDC4Q8N2C3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.17■□□□□ 0.5
DEPDC4Q8N2C3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEPDC4Q8N2C3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DEPDC4Q8N2C3 AC020763.4-201ENST00000623414 4170 ntBASIC18.17■□□□□ 0.5
DEPDC4Q8N2C3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEPDC4Q8N2C3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms