Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 AC231657.2-201ENST00000624556 255 ntBASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 AL032819.2-201ENST00000624543 2162 ntBASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CRLF3Q8IUI8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.56■□□□□ 0.72
CRLF3Q8IUI8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 PGM5P4-201ENST00000421970 445 ntBASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 AC007322.1-201ENST00000426983 750 ntBASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 LINC01465-201ENST00000408887 1940 ntBASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.55■□□□□ 0.72
CRLF3Q8IUI8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 RBM17P2-201ENST00000616397 1405 ntBASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 AC010536.3-201ENST00000620306 533 ntBASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.54■□□□□ 0.72
CRLF3Q8IUI8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.53■□□□□ 0.72
CRLF3Q8IUI8 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms