Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 AC007322.4-201ENST00000509611 723 ntBASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM1Q86UE6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
LRRTM1Q86UE6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 AL161938.1-201ENST00000569833 2180 ntBASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 HLA-G-202ENST00000376815 851 ntBASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 HLA-G-203ENST00000376818 1127 ntBASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 MCRIP2P1-201ENST00000394346 511 ntBASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 AC100791.3-201ENST00000617619 330 ntBASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM1Q86UE6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17■□□□□ 0.31
LRRTM1Q86UE6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LRRTM1Q86UE6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
LRRTM1Q86UE6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17■□□□□ 0.31
LRRTM1Q86UE6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17■□□□□ 0.31
LRRTM1Q86UE6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17■□□□□ 0.31
LRRTM1Q86UE6 AC105020.6-201ENST00000621523 1217 ntBASIC17■□□□□ 0.31
LRRTM1Q86UE6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17■□□□□ 0.31
LRRTM1Q86UE6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
LRRTM1Q86UE6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17■□□□□ 0.31
LRRTM1Q86UE6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17■□□□□ 0.31
LRRTM1Q86UE6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM1Q86UE6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 LETM1P2-201ENST00000597330 2178 ntBASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM1Q86UE6 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms