Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 PGRMC2-205ENST00000509070 430 ntTSL 215.32■□□□□ 0.046e-10■■□□□ 14.4
SND1Q7KZF4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.65□□□□□ -0.066e-10■■□□□ 14.4
SND1Q7KZF4 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC10.18□□□□□ -0.786e-10■■□□□ 14.4
SND1Q7KZF4 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC8.08□□□□□ -1.126e-10■■□□□ 14.4
SND1Q7KZF4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC7.91□□□□□ -1.146e-10■■□□□ 14.4
SND1Q7KZF4 CEACAM1-211ENST00000485605 678 ntTSL 57.69□□□□□ -1.183e-9■■□□□ 14.4
SND1Q7KZF4 CP-211ENST00000489736 1756 ntTSL 1 (best)6.67□□□□□ -1.347e-12■■□□□ 14.4
SND1Q7KZF4 DCAF7-206ENST00000615512 751 ntTSL 515.95■□□□□ 0.141e-7■■□□□ 14.4
SND1Q7KZF4 ALG1-203ENST00000586840 582 ntTSL 425.25■■□□□ 1.637e-8■■□□□ 14.4
SND1Q7KZF4 TECR-204ENST00000594545 735 ntTSL 321.29■■□□□ 11e-9■■□□□ 14.4
SND1Q7KZF4 C3-203ENST00000594270 349 ntTSL 511□□□□□ -0.654e-51■■□□□ 14.4
SND1Q7KZF4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.042e-6■■□□□ 14.4
SND1Q7KZF4 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.022e-6■■□□□ 14.4
SND1Q7KZF4 YWHAQ-205ENST00000474715 709 ntTSL 37.01□□□□□ -1.292e-6■■□□□ 14.4
SND1Q7KZF4 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC13.02□□□□□ -0.334e-51■■□□□ 14.4
SND1Q7KZF4 SRPRA-204ENST00000530680 558 ntTSL 415.48■□□□□ 0.072e-12■■□□□ 14.3
SND1Q7KZF4 ARL10-204ENST00000514533 258 ntTSL 315.15■□□□□ 0.021e-6■■□□□ 14.3
SND1Q7KZF4 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.21e-6■■□□□ 14.3
SND1Q7KZF4 EIF2A-214ENST00000487799 1913 ntTSL 2 BASIC13.19□□□□□ -0.31e-6■■□□□ 14.3
SND1Q7KZF4 SRPRA-203ENST00000528744 856 ntTSL 211.87□□□□□ -0.512e-12■■□□□ 14.3
SND1Q7KZF4 EIF2A-203ENST00000460851 2198 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.571e-6■■□□□ 14.3
SND1Q7KZF4 EIF2A-206ENST00000465535 1273 ntTSL 58.54□□□□□ -1.041e-6■■□□□ 14.3
SND1Q7KZF4 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.17□□□□□ -1.11e-6■■□□□ 14.3
SND1Q7KZF4 LRIG2-202ENST00000466069 564 ntTSL 26.29□□□□□ -1.41e-6■■□□□ 14.3
SND1Q7KZF4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.471e-6■■□□□ 14.3
SND1Q7KZF4 EIF2A-211ENST00000477551 1906 ntTSL 1 (best)4.65□□□□□ -1.671e-6■■□□□ 14.3
SND1Q7KZF4 SLC43A3-212ENST00000529113 541 ntTSL 514.11□□□□□ -0.152e-18■■□□□ 14.3
SND1Q7KZF4 FN1-214ENST00000460217 804 ntTSL 211.14□□□□□ -0.633e-6■■□□□ 14.3
SND1Q7KZF4 FN1-210ENST00000438981 723 ntTSL 28.24□□□□□ -1.093e-6■■□□□ 14.3
SND1Q7KZF4 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.282e-6■■□□□ 14.3
SND1Q7KZF4 EIF3D-203ENST00000405442 1851 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.762e-6■■□□□ 14.3
SND1Q7KZF4 EIF3D-208ENST00000458572 883 ntTSL 38.91□□□□□ -0.982e-6■■□□□ 14.3
SND1Q7KZF4 SLC38A2-203ENST00000547252 847 ntTSL 38.95□□□□□ -0.983e-21■■□□□ 14.3
SND1Q7KZF4 SLC43A3-206ENST00000525474 801 ntTSL 510.44□□□□□ -0.741e-9■■□□□ 14.3
SND1Q7KZF4 C3-209ENST00000597442 469 ntTSL 313.1□□□□□ -0.313e-51■■□□□ 14.3
SND1Q7KZF4 GGT1-210ENST00000412658 2091 ntTSL 518.13■□□□□ 0.499e-8■■□□□ 14.3
SND1Q7KZF4 SLC37A4-209ENST00000526626 730 ntTSL 513.42□□□□□ -0.262e-8■■□□□ 14.3
SND1Q7KZF4 SLC37A4-214ENST00000532888 1351 ntTSL 510.39□□□□□ -0.752e-8■■□□□ 14.3
SND1Q7KZF4 CD46-213ENST00000471987 572 ntTSL 38.79□□□□□ -19e-16■■□□□ 14.3
SND1Q7KZF4 CD46-215ENST00000488596 872 ntTSL 35.76□□□□□ -1.499e-16■■□□□ 14.3
SND1Q7KZF4 CD46-210ENST00000462968 473 ntTSL 33.22□□□□□ -1.899e-16■■□□□ 14.3
SND1Q7KZF4 RRM2-210ENST00000498343 560 ntTSL 212.52□□□□□ -0.411e-13■■□□□ 14.3
SND1Q7KZF4 TCN1-202ENST00000529251 476 ntTSL 36.9□□□□□ -1.31e-13■■□□□ 14.3
SND1Q7KZF4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.951e-10■■□□□ 14.3
SND1Q7KZF4 ITGA5-213ENST00000553071 1013 ntTSL 1 (best)17.96■□□□□ 0.472e-6■■□□□ 14.3
SND1Q7KZF4 CP-213ENST00000494544 2806 ntTSL 1 (best)5.23□□□□□ -1.571e-8■■□□□ 14.3
SND1Q7KZF4 SERPINC1-203ENST00000494024 669 ntTSL 37.41□□□□□ -1.225e-7■■□□□ 14.3
SND1Q7KZF4 LAMA5-204ENST00000462415 585 ntTSL 217.75■□□□□ 0.431e-28■■□□□ 14.3
SND1Q7KZF4 ERGIC3-213ENST00000475211 514 ntTSL 314.33□□□□□ -0.127e-11■■□□□ 14.3
SND1Q7KZF4 ERGIC3-212ENST00000465298 505 ntTSL 213.78□□□□□ -0.29e-9■■□□□ 14.3
SND1Q7KZF4 GRN-215ENST00000589536 546 ntTSL 325.15■■□□□ 1.627e-14■■□□□ 14.3
SND1Q7KZF4 GRN-220ENST00000592783 541 ntTSL 416.12■□□□□ 0.177e-14■■□□□ 14.3
SND1Q7KZF4 GRN-219ENST00000592323 550 ntTSL 416.1■□□□□ 0.177e-14■■□□□ 14.3
SND1Q7KZF4 GRN-209ENST00000587518 526 ntTSL 415.84■□□□□ 0.137e-14■■□□□ 14.3
SND1Q7KZF4 GRN-218ENST00000591740 585 ntTSL 415.63■□□□□ 0.097e-14■■□□□ 14.3
SND1Q7KZF4 GRN-212ENST00000588170 588 ntTSL 215.63■□□□□ 0.097e-14■■□□□ 14.3
SND1Q7KZF4 GRN-210ENST00000587958 560 ntTSL 215.4■□□□□ 0.067e-14■■□□□ 14.3
SND1Q7KZF4 SLC38A1-210ENST00000552197 2599 ntTSL 1 (best) BASIC11.47□□□□□ -0.574e-9■■□□□ 14.3
SND1Q7KZF4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC9.08□□□□□ -0.964e-9■■□□□ 14.3
SND1Q7KZF4 PPT2-253ENST00000478521 584 ntTSL 316.87■□□□□ 0.299e-7■■□□□ 14.2
SND1Q7KZF4 AARS-202ENST00000564359 590 ntTSL 310.55□□□□□ -0.721e-11■■□□□ 14.2
SND1Q7KZF4 HYOU1-216ENST00000610597 491 ntTSL 415.55■□□□□ 0.084e-8■■□□□ 14.2
SND1Q7KZF4 CANX-212ENST00000506654 592 ntTSL 323.72■■□□□ 1.391e-15■■□□□ 14.2
SND1Q7KZF4 FST-205ENST00000504226 705 ntTSL 310.1□□□□□ -0.793e-8■■□□□ 14.2
SND1Q7KZF4 C2-203ENST00000411571 773 ntTSL 514.05□□□□□ -0.163e-10■■□□□ 14.2
SND1Q7KZF4 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.772e-7■■□□□ 14.2
SND1Q7KZF4 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.772e-7■■□□□ 14.2
SND1Q7KZF4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.653e-7■■□□□ 14.2
SND1Q7KZF4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.293e-7■■□□□ 14.2
SND1Q7KZF4 NDUFAB1-203ENST00000562133 503 ntTSL 216.35■□□□□ 0.213e-7■■□□□ 14.2
SND1Q7KZF4 NDUFAB1-202ENST00000484769 843 ntTSL 314.01□□□□□ -0.173e-7■■□□□ 14.2
SND1Q7KZF4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.782e-8■■□□□ 14.2
SND1Q7KZF4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.52e-8■■□□□ 14.2
SND1Q7KZF4 SLC38A5-205ENST00000441948 871 ntTSL 514.78□□□□□ -0.046e-8■■□□□ 14.2
SND1Q7KZF4 ICAM2-210ENST00000580389 586 ntTSL 214.14□□□□□ -0.151e-9■■□□□ 14.2
SND1Q7KZF4 ICAM2-209ENST00000580011 1297 ntTSL 214.03□□□□□ -0.161e-9■■□□□ 14.2
SND1Q7KZF4 SLC38A5-204ENST00000440085 910 ntTSL 313.95□□□□□ -0.186e-8■■□□□ 14.2
SND1Q7KZF4 GOT2-207ENST00000568368 516 ntTSL 413.33□□□□□ -0.281e-9■■□□□ 14.2
SND1Q7KZF4 GOT2-203ENST00000492378 987 ntTSL 213.15□□□□□ -0.31e-9■■□□□ 14.2
SND1Q7KZF4 ICAM2-216ENST00000584403 729 ntTSL 312.58□□□□□ -0.41e-9■■□□□ 14.2
SND1Q7KZF4 ICAM2-215ENST00000584084 718 ntTSL 29.73□□□□□ -0.851e-9■■□□□ 14.2
SND1Q7KZF4 COX7B-202ENST00000475465 685 ntTSL 29.35□□□□□ -0.914e-31■■□□□ 14.2
SND1Q7KZF4 NUP37-205ENST00000548994 382 ntTSL 39.31□□□□□ -0.921e-9■■□□□ 14.2
SND1Q7KZF4 SLC43A3-209ENST00000528098 1260 ntTSL 215.24■□□□□ 0.036e-10■■□□□ 14.2
SND1Q7KZF4 C3-205ENST00000595577 714 ntTSL 213.75□□□□□ -0.212e-51■■□□□ 14.2
SND1Q7KZF4 FN1-221ENST00000480737 384 ntTSL 25.81□□□□□ -1.484e-7■■□□□ 14.2
SND1Q7KZF4 CPVL-209ENST00000455544 571 ntTSL 413.44□□□□□ -0.268e-7■■□□□ 14.2
SND1Q7KZF4 CPVL-208ENST00000449801 528 ntTSL 410.97□□□□□ -0.658e-7■■□□□ 14.2
SND1Q7KZF4 SHISA5-205ENST00000424965 884 ntTSL 517.11■□□□□ 0.331e-9■■□□□ 14.2
SND1Q7KZF4 FREM1-203ENST00000380894 2481 ntTSL 1 (best) BASIC9.71□□□□□ -0.863e-9■■□□□ 14.2
SND1Q7KZF4 STT3B-206ENST00000463044 912 ntTSL 36.96□□□□□ -1.32e-9■■□□□ 14.2
SND1Q7KZF4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.53□□□□□ -1.521e-9■■□□□ 14.2
SND1Q7KZF4 HMGCR-212ENST00000514315 603 ntTSL 37.25□□□□□ -1.252e-7■■□□□ 14.2
SND1Q7KZF4 SLC2A8-205ENST00000419917 793 ntTSL 322.27■■□□□ 1.167e-7■■□□□ 14.2
SND1Q7KZF4 PTK7-220ENST00000497957 713 ntTSL 316.54■□□□□ 0.246e-9■■□□□ 14.2
SND1Q7KZF4 PTK7-218ENST00000493339 2987 ntTSL 214.87□□□□□ -0.036e-9■■□□□ 14.2
SND1Q7KZF4 LDLR-209ENST00000558528 456 ntTSL 27.28□□□□□ -1.242e-9■■□□□ 14.2
SND1Q7KZF4 COX7C-204ENST00000510447 581 ntTSL 311.23□□□□□ -0.612e-9■■□□□ 14.2
SND1Q7KZF4 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.373e-6■■□□□ 14.2
SND1Q7KZF4 VCL-201ENST00000211998 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.533e-6■■□□□ 14.2
Retrieved 100 of 13,567 protein–RNA pairs in 523.4 ms