Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 AC018553.1-201ENST00000616682 1458 ntBASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 AC098818.2-201ENST00000564925 2320 ntBASIC17.63■□□□□ 0.41
NHLRC1Q6VVB1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 TFP1-202ENST00000475455 1573 ntBASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 AC120498.8-201ENST00000614275 531 ntBASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.62■□□□□ 0.41
NHLRC1Q6VVB1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 AC018445.3-201ENST00000624177 1945 ntBASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 RPS2P52-201ENST00000469610 820 ntBASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.61■□□□□ 0.41
NHLRC1Q6VVB1 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 AC124283.5-201ENST00000624661 1809 ntBASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
NHLRC1Q6VVB1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 AL158211.5-201ENST00000623583 2518 ntBASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.59■□□□□ 0.41
NHLRC1Q6VVB1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms