Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 AL512408.1-201ENST00000569378 2000 ntBASIC17.98■□□□□ 0.47
ZNF544Q6NX49 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF544Q6NX49 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.98■□□□□ 0.47
ZNF544Q6NX49 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF544Q6NX49 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ZNF544Q6NX49 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 AC073210.2-201ENST00000430369 194 ntBASIC17.97■□□□□ 0.47
ZNF544Q6NX49 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 AL591742.1-201ENST00000604433 565 ntBASIC17.97■□□□□ 0.47
ZNF544Q6NX49 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 AC133041.1-202ENST00000642053 222 ntBASIC17.97■□□□□ 0.47
ZNF544Q6NX49 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ZNF544Q6NX49 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 LTB4R2-202ENST00000528054 3092 ntBASIC17.96■□□□□ 0.47
ZNF544Q6NX49 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ZNF544Q6NX49 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ZNF544Q6NX49 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 AC020916.1-201ENST00000587762 1774 ntBASIC17.95■□□□□ 0.46
ZNF544Q6NX49 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 MIR4758-201ENST00000577688 71 ntBASIC17.95■□□□□ 0.46
ZNF544Q6NX49 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
ZNF544Q6NX49 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ZNF544Q6NX49 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF544Q6NX49 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ZNF544Q6NX49 AC099778.1-201ENST00000568593 1911 ntBASIC17.94■□□□□ 0.46
ZNF544Q6NX49 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF544Q6NX49 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF544Q6NX49 MKRN4P-201ENST00000444706 1521 ntBASIC17.94■□□□□ 0.46
ZNF544Q6NX49 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF544Q6NX49 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF544Q6NX49 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.94■□□□□ 0.46
ZNF544Q6NX49 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF544Q6NX49 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ZNF544Q6NX49 AC069152.1-201ENST00000438030 544 ntBASIC17.94■□□□□ 0.46
ZNF544Q6NX49 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF544Q6NX49 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ZNF544Q6NX49 AL138781.1-201ENST00000566567 1274 ntBASIC17.94■□□□□ 0.46
ZNF544Q6NX49 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms