Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.81■□□□□ 0.92
VARS2Q5ST30 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.81■□□□□ 0.92
VARS2Q5ST30 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
VARS2Q5ST30 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 FEM1AP1-201ENST00000431297 1995 ntBASIC20.81■□□□□ 0.92
VARS2Q5ST30 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.81■□□□□ 0.92
VARS2Q5ST30 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.81■□□□□ 0.92
VARS2Q5ST30 KRT18P35-201ENST00000510488 1269 ntBASIC20.81■□□□□ 0.92
VARS2Q5ST30 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.81■□□□□ 0.92
VARS2Q5ST30 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.81■□□□□ 0.92
VARS2Q5ST30 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.81■□□□□ 0.92
VARS2Q5ST30 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
VARS2Q5ST30 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
VARS2Q5ST30 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
VARS2Q5ST30 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VARS2Q5ST30 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VARS2Q5ST30 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.8■□□□□ 0.92
VARS2Q5ST30 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.8■□□□□ 0.92
VARS2Q5ST30 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
VARS2Q5ST30 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
VARS2Q5ST30 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.8■□□□□ 0.92
VARS2Q5ST30 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VARS2Q5ST30 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.8■□□□□ 0.92
VARS2Q5ST30 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.8■□□□□ 0.92
VARS2Q5ST30 NAPSB-206ENST00000562112 1266 ntBASIC20.8■□□□□ 0.92
VARS2Q5ST30 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.8■□□□□ 0.92
VARS2Q5ST30 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VARS2Q5ST30 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.8■□□□□ 0.92
VARS2Q5ST30 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
VARS2Q5ST30 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VARS2Q5ST30 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
VARS2Q5ST30 AL162377.1-201ENST00000618844 1793 ntBASIC20.8■□□□□ 0.92
VARS2Q5ST30 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARS2Q5ST30 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
VARS2Q5ST30 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARS2Q5ST30 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
VARS2Q5ST30 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARS2Q5ST30 TMPOP1-202ENST00000424642 1267 ntBASIC20.79■□□□□ 0.92
VARS2Q5ST30 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VARS2Q5ST30 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
VARS2Q5ST30 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.79■□□□□ 0.92
VARS2Q5ST30 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.79■□□□□ 0.92
VARS2Q5ST30 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARS2Q5ST30 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
VARS2Q5ST30 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.79■□□□□ 0.92
VARS2Q5ST30 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.79■□□□□ 0.92
VARS2Q5ST30 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARS2Q5ST30 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARS2Q5ST30 AC010947.1-201ENST00000623454 693 ntBASIC20.79■□□□□ 0.92
VARS2Q5ST30 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
VARS2Q5ST30 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
VARS2Q5ST30 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARS2Q5ST30 LINC01568-207ENST00000641790 1380 ntBASIC20.79■□□□□ 0.92
VARS2Q5ST30 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VARS2Q5ST30 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VARS2Q5ST30 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VARS2Q5ST30 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
VARS2Q5ST30 KRT8P8-201ENST00000434750 1448 ntBASIC20.78■□□□□ 0.92
VARS2Q5ST30 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VARS2Q5ST30 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARS2Q5ST30 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VARS2Q5ST30 AL691432.2-201ENST00000607222 2038 ntBASIC20.78■□□□□ 0.92
VARS2Q5ST30 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VARS2Q5ST30 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARS2Q5ST30 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARS2Q5ST30 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.78■□□□□ 0.92
VARS2Q5ST30 GABARAPL3-202ENST00000624044 1851 ntBASIC20.78■□□□□ 0.92
VARS2Q5ST30 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
VARS2Q5ST30 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARS2Q5ST30 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.78■□□□□ 0.92
VARS2Q5ST30 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARS2Q5ST30 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARS2Q5ST30 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.78■□□□□ 0.92
VARS2Q5ST30 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.78■□□□□ 0.92
VARS2Q5ST30 DGCR10-201ENST00000609839 495 ntBASIC20.78■□□□□ 0.92
VARS2Q5ST30 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.78■□□□□ 0.92
VARS2Q5ST30 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VARS2Q5ST30 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
VARS2Q5ST30 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.78■□□□□ 0.92
VARS2Q5ST30 AL391422.3-201ENST00000603791 2761 ntBASIC20.78■□□□□ 0.92
VARS2Q5ST30 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VARS2Q5ST30 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VARS2Q5ST30 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VARS2Q5ST30 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
VARS2Q5ST30 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VARS2Q5ST30 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.77■□□□□ 0.92
VARS2Q5ST30 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VARS2Q5ST30 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
VARS2Q5ST30 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms