Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC9.85□□□□□ -0.83
LINC01554Q52M75 AC093503.3-201ENST00000624917 2352 ntBASIC9.85□□□□□ -0.83
LINC01554Q52M75 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
LINC01554Q52M75 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 GUK1-208ENST00000366728 842 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 TK2-202ENST00000417693 1046 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 ME2-218ENST00000640965 2476 ntTSL 5 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 AC004687.1-201ENST00000579003 1625 ntBASIC9.84□□□□□ -0.83
LINC01554Q52M75 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 AP005212.1-201ENST00000581547 1997 ntBASIC9.84□□□□□ -0.83
LINC01554Q52M75 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC9.84□□□□□ -0.83
LINC01554Q52M75 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
LINC01554Q52M75 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.84
LINC01554Q52M75 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 AL033527.3-201ENST00000566366 1196 ntBASIC9.83□□□□□ -0.84
LINC01554Q52M75 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 SNX5-217ENST00000606557 1087 ntBASIC9.83□□□□□ -0.84
LINC01554Q52M75 AC009086.3-201ENST00000623486 1008 ntBASIC9.83□□□□□ -0.84
LINC01554Q52M75 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC9.83□□□□□ -0.84
LINC01554Q52M75 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
LINC01554Q52M75 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms