Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.35■□□□□ 0.85
IRX4P78413 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
IRX4P78413 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.35■□□□□ 0.85
IRX4P78413 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
IRX4P78413 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 TSPY15P-201ENST00000457163 923 ntBASIC20.35■□□□□ 0.85
IRX4P78413 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.35■□□□□ 0.85
IRX4P78413 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.35■□□□□ 0.85
IRX4P78413 AL023875.1-201ENST00000640777 796 ntBASIC20.35■□□□□ 0.85
IRX4P78413 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
IRX4P78413 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
IRX4P78413 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.35■□□□□ 0.85
IRX4P78413 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.35■□□□□ 0.85
IRX4P78413 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
IRX4P78413 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.34■□□□□ 0.85
IRX4P78413 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
IRX4P78413 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
IRX4P78413 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.34■□□□□ 0.85
IRX4P78413 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.34■□□□□ 0.85
IRX4P78413 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.34■□□□□ 0.85
IRX4P78413 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 AC124016.1-201ENST00000609552 612 ntBASIC20.34■□□□□ 0.85
IRX4P78413 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.34■□□□□ 0.85
IRX4P78413 CYP21A1P-202ENST00000354927 1481 ntBASIC20.34■□□□□ 0.85
IRX4P78413 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
IRX4P78413 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.34■□□□□ 0.85
IRX4P78413 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
IRX4P78413 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.34■□□□□ 0.85
IRX4P78413 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.34■□□□□ 0.85
IRX4P78413 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
IRX4P78413 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IRX4P78413 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IRX4P78413 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
IRX4P78413 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.33■□□□□ 0.85
IRX4P78413 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
IRX4P78413 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
IRX4P78413 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.33■□□□□ 0.85
IRX4P78413 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.33■□□□□ 0.85
IRX4P78413 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
IRX4P78413 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
IRX4P78413 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IRX4P78413 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
IRX4P78413 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
IRX4P78413 AC087499.1-201ENST00000418141 1075 ntBASIC20.33■□□□□ 0.85
IRX4P78413 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.33■□□□□ 0.85
IRX4P78413 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.33■□□□□ 0.85
IRX4P78413 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
IRX4P78413 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
IRX4P78413 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.33■□□□□ 0.85
IRX4P78413 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IRX4P78413 AP001412.1-201ENST00000608405 714 ntBASIC20.33■□□□□ 0.85
IRX4P78413 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.33■□□□□ 0.84
IRX4P78413 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.33■□□□□ 0.84
IRX4P78413 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
IRX4P78413 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
IRX4P78413 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.33■□□□□ 0.84
IRX4P78413 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.32■□□□□ 0.84
IRX4P78413 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX4P78413 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
IRX4P78413 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IRX4P78413 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX4P78413 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX4P78413 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX4P78413 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.32■□□□□ 0.84
IRX4P78413 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
IRX4P78413 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.32■□□□□ 0.84
IRX4P78413 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.32■□□□□ 0.84
IRX4P78413 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IRX4P78413 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IRX4P78413 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.32■□□□□ 0.84
IRX4P78413 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
IRX4P78413 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX4P78413 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX4P78413 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
IRX4P78413 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IRX4P78413 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms