Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SNRPFP62306 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.37■■□□□ 1.01
SNRPFP62306 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNRPFP62306 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.37■■□□□ 1.01
SNRPFP62306 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.37■■□□□ 1.01
SNRPFP62306 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SNRPFP62306 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
SNRPFP62306 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.37■■□□□ 1.01
SNRPFP62306 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNRPFP62306 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNRPFP62306 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.37■■□□□ 1.01
SNRPFP62306 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
SNRPFP62306 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.37■■□□□ 1.01
SNRPFP62306 ITM2C-210ENST00000620962 501 ntBASIC21.37■■□□□ 1.01
SNRPFP62306 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.37■■□□□ 1.01
SNRPFP62306 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SNRPFP62306 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.37■■□□□ 1.01
SNRPFP62306 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SNRPFP62306 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SNRPFP62306 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SNRPFP62306 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRPFP62306 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNRPFP62306 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.36■■□□□ 1.01
SNRPFP62306 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNRPFP62306 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRPFP62306 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.36■■□□□ 1.01
SNRPFP62306 AC239809.2-201ENST00000415381 517 ntBASIC21.36■■□□□ 1.01
SNRPFP62306 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
SNRPFP62306 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNRPFP62306 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.36■■□□□ 1.01
SNRPFP62306 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.36■■□□□ 1.01
SNRPFP62306 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.36■■□□□ 1.01
SNRPFP62306 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SNRPFP62306 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
SNRPFP62306 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.36■■□□□ 1.01
SNRPFP62306 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.36■■□□□ 1.01
SNRPFP62306 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.36■■□□□ 1.01
SNRPFP62306 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRPFP62306 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.36■■□□□ 1.01
SNRPFP62306 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.36■■□□□ 1.01
SNRPFP62306 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRPFP62306 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRPFP62306 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SNRPFP62306 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SNRPFP62306 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.36■■□□□ 1.01
SNRPFP62306 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.35■■□□□ 1.01
SNRPFP62306 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.35■■□□□ 1.01
SNRPFP62306 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.35■■□□□ 1.01
SNRPFP62306 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.35■■□□□ 1.01
SNRPFP62306 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.35■■□□□ 1.01
SNRPFP62306 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.35■■□□□ 1.01
SNRPFP62306 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.35■■□□□ 1.01
SNRPFP62306 AC124016.1-201ENST00000609552 612 ntBASIC21.35■■□□□ 1.01
SNRPFP62306 AC110285.5-201ENST00000611501 352 ntBASIC21.35■■□□□ 1.01
SNRPFP62306 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 AL023875.1-201ENST00000640777 796 ntBASIC21.35■■□□□ 1.01
SNRPFP62306 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.35■■□□□ 1.01
SNRPFP62306 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SNRPFP62306 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
SNRPFP62306 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SNRPFP62306 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.35■■□□□ 1.01
SNRPFP62306 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRPFP62306 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SNRPFP62306 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRPFP62306 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SNRPFP62306 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SNRPFP62306 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.34■■□□□ 1.01
SNRPFP62306 TSPY20P-201ENST00000450910 630 ntBASIC21.34■■□□□ 1.01
SNRPFP62306 KRT16P5-201ENST00000455284 522 ntBASIC21.34■■□□□ 1.01
SNRPFP62306 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRPFP62306 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.34■■□□□ 1.01
SNRPFP62306 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.34■■□□□ 1.01
SNRPFP62306 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.34■■□□□ 1.01
SNRPFP62306 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.34■■□□□ 1.01
SNRPFP62306 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SNRPFP62306 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SNRPFP62306 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRPFP62306 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SNRPFP62306 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.34■■□□□ 1.01
SNRPFP62306 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.34■■□□□ 1.01
SNRPFP62306 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.34■■□□□ 1.01
SNRPFP62306 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SNRPFP62306 AL158211.5-201ENST00000623583 2518 ntBASIC21.33■■□□□ 1.01
SNRPFP62306 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SNRPFP62306 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SNRPFP62306 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SNRPFP62306 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms