Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.54■□□□□ 0.56
NR1H2P55055 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.54■□□□□ 0.56
NR1H2P55055 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 MFSD11-216ENST00000590393 1141 ntBASIC18.54■□□□□ 0.56
NR1H2P55055 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NR1H2P55055 AP001160.3-201ENST00000601484 763 ntBASIC18.54■□□□□ 0.56
NR1H2P55055 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.54■□□□□ 0.56
NR1H2P55055 AC231657.2-201ENST00000624556 255 ntBASIC18.54■□□□□ 0.56
NR1H2P55055 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NR1H2P55055 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
NR1H2P55055 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.54■□□□□ 0.56
NR1H2P55055 AC018470.1-201ENST00000624790 3129 ntBASIC18.54■□□□□ 0.56
NR1H2P55055 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
NR1H2P55055 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
NR1H2P55055 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NR1H2P55055 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.53■□□□□ 0.56
NR1H2P55055 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NR1H2P55055 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.53■□□□□ 0.56
NR1H2P55055 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.53■□□□□ 0.56
NR1H2P55055 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NR1H2P55055 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.53■□□□□ 0.56
NR1H2P55055 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
NR1H2P55055 CROCCP5-201ENST00000436658 830 ntBASIC18.53■□□□□ 0.56
NR1H2P55055 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.53■□□□□ 0.56
NR1H2P55055 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.53■□□□□ 0.56
NR1H2P55055 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.53■□□□□ 0.56
NR1H2P55055 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
NR1H2P55055 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.53■□□□□ 0.56
NR1H2P55055 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NR1H2P55055 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NR1H2P55055 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.52■□□□□ 0.56
NR1H2P55055 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
NR1H2P55055 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.52■□□□□ 0.56
NR1H2P55055 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 MIR663A-201ENST00000385250 93 ntBASIC18.52■□□□□ 0.56
NR1H2P55055 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.52■□□□□ 0.56
NR1H2P55055 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.52■□□□□ 0.56
NR1H2P55055 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NR1H2P55055 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NR1H2P55055 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NR1H2P55055 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.52■□□□□ 0.55
NR1H2P55055 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.52■□□□□ 0.55
NR1H2P55055 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
NR1H2P55055 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NR1H2P55055 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
NR1H2P55055 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.51■□□□□ 0.55
NR1H2P55055 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 AC135050.7-201ENST00000624508 2218 ntBASIC18.51■□□□□ 0.55
NR1H2P55055 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.51■□□□□ 0.55
NR1H2P55055 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NR1H2P55055 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NR1H2P55055 NCF1B-203ENST00000435988 1254 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms