Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDX1P52945 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.07■□□□□ 0.64
PDX1P52945 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDX1P52945 GABARAPL3-202ENST00000624044 1851 ntBASIC19.07■□□□□ 0.64
PDX1P52945 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDX1P52945 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDX1P52945 MIR1238-201ENST00000408483 83 ntBASIC19.07■□□□□ 0.64
PDX1P52945 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.07■□□□□ 0.64
PDX1P52945 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
PDX1P52945 AC116562.2-201ENST00000507042 360 ntBASIC19.07■□□□□ 0.64
PDX1P52945 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.07■□□□□ 0.64
PDX1P52945 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.07■□□□□ 0.64
PDX1P52945 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PDX1P52945 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDX1P52945 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDX1P52945 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDX1P52945 KRT8P20-201ENST00000423953 1409 ntBASIC19.07■□□□□ 0.64
PDX1P52945 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PDX1P52945 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PDX1P52945 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDX1P52945 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
PDX1P52945 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
PDX1P52945 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.06■□□□□ 0.64
PDX1P52945 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 CYP2D8P-201ENST00000433633 1490 ntBASIC19.06■□□□□ 0.64
PDX1P52945 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.06■□□□□ 0.64
PDX1P52945 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PDX1P52945 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.06■□□□□ 0.64
PDX1P52945 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.06■□□□□ 0.64
PDX1P52945 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.06■□□□□ 0.64
PDX1P52945 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.06■□□□□ 0.64
PDX1P52945 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.06■□□□□ 0.64
PDX1P52945 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.06■□□□□ 0.64
PDX1P52945 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.06■□□□□ 0.64
PDX1P52945 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.06■□□□□ 0.64
PDX1P52945 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PDX1P52945 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.06■□□□□ 0.64
PDX1P52945 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDX1P52945 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.05■□□□□ 0.64
PDX1P52945 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDX1P52945 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDX1P52945 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.05■□□□□ 0.64
PDX1P52945 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDX1P52945 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PDX1P52945 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDX1P52945 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDX1P52945 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDX1P52945 AC005521.1-201ENST00000393351 872 ntBASIC19.05■□□□□ 0.64
PDX1P52945 AC113347.1-201ENST00000413321 391 ntBASIC19.05■□□□□ 0.64
PDX1P52945 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.05■□□□□ 0.64
PDX1P52945 KSR1P1-201ENST00000446298 240 ntBASIC19.05■□□□□ 0.64
PDX1P52945 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.05■□□□□ 0.64
PDX1P52945 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.05■□□□□ 0.64
PDX1P52945 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.05■□□□□ 0.64
PDX1P52945 AC005363.2-201ENST00000618631 242 ntBASIC19.05■□□□□ 0.64
PDX1P52945 CR392000.1-201ENST00000624770 1228 ntBASIC19.05■□□□□ 0.64
PDX1P52945 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.05■□□□□ 0.64
PDX1P52945 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.05■□□□□ 0.64
PDX1P52945 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PDX1P52945 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PDX1P52945 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDX1P52945 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDX1P52945 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PDX1P52945 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PDX1P52945 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDX1P52945 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDX1P52945 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.04■□□□□ 0.64
PDX1P52945 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.04■□□□□ 0.64
PDX1P52945 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.04■□□□□ 0.64
PDX1P52945 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.04■□□□□ 0.64
PDX1P52945 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.04■□□□□ 0.64
PDX1P52945 FITM1-202ENST00000559294 800 ntBASIC19.04■□□□□ 0.64
PDX1P52945 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PDX1P52945 AC010947.1-201ENST00000623454 693 ntBASIC19.04■□□□□ 0.64
PDX1P52945 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
PDX1P52945 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PDX1P52945 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.03■□□□□ 0.64
PDX1P52945 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.03■□□□□ 0.64
PDX1P52945 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDX1P52945 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.03■□□□□ 0.64
PDX1P52945 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.03■□□□□ 0.64
PDX1P52945 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDX1P52945 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.03■□□□□ 0.64
PDX1P52945 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.03■□□□□ 0.64
PDX1P52945 KRT16P1-201ENST00000399124 1418 ntBASIC19.03■□□□□ 0.64
PDX1P52945 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PDX1P52945 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
PDX1P52945 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms