Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCNFP41002 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCNFP41002 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.73■□□□□ 0.75
CCNFP41002 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCNFP41002 AC104771.1-201ENST00000603335 964 ntBASIC19.73■□□□□ 0.75
CCNFP41002 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCNFP41002 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.73■□□□□ 0.75
CCNFP41002 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCNFP41002 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.73■□□□□ 0.75
CCNFP41002 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCNFP41002 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCNFP41002 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCNFP41002 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCNFP41002 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.72■□□□□ 0.75
CCNFP41002 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCNFP41002 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCNFP41002 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
CCNFP41002 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.72■□□□□ 0.75
CCNFP41002 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.72■□□□□ 0.75
CCNFP41002 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.72■□□□□ 0.75
CCNFP41002 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.72■□□□□ 0.75
CCNFP41002 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCNFP41002 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCNFP41002 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.71■□□□□ 0.75
CCNFP41002 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCNFP41002 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CCNFP41002 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 ID1-201ENST00000376105 1233 ntBASIC19.71■□□□□ 0.75
CCNFP41002 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.71■□□□□ 0.75
CCNFP41002 C2orf69P4-201ENST00000565394 541 ntBASIC19.71■□□□□ 0.75
CCNFP41002 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.71■□□□□ 0.75
CCNFP41002 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.71■□□□□ 0.75
CCNFP41002 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.71■□□□□ 0.75
CCNFP41002 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.71■□□□□ 0.75
CCNFP41002 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.71■□□□□ 0.75
CCNFP41002 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.71■□□□□ 0.75
CCNFP41002 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCNFP41002 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCNFP41002 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNFP41002 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNFP41002 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNFP41002 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNFP41002 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCNFP41002 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCNFP41002 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.7■□□□□ 0.74
CCNFP41002 AC073210.2-201ENST00000430369 194 ntBASIC19.7■□□□□ 0.74
CCNFP41002 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.7■□□□□ 0.74
CCNFP41002 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCNFP41002 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.7■□□□□ 0.74
CCNFP41002 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CCNFP41002 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.7■□□□□ 0.74
CCNFP41002 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CCNFP41002 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNFP41002 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNFP41002 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNFP41002 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNFP41002 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms