Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SOX6P35712 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.59■□□□□ 0.41
SOX6P35712 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.59■□□□□ 0.41
SOX6P35712 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX6P35712 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.59■□□□□ 0.41
SOX6P35712 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX6P35712 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 AL136162.1-201ENST00000607711 1078 ntBASIC17.59■□□□□ 0.41
SOX6P35712 AC011298.3-201ENST00000615796 283 ntBASIC17.59■□□□□ 0.41
SOX6P35712 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SOX6P35712 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SOX6P35712 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SOX6P35712 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX6P35712 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.59■□□□□ 0.41
SOX6P35712 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
SOX6P35712 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SOX6P35712 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SOX6P35712 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX6P35712 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX6P35712 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.58■□□□□ 0.41
SOX6P35712 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.58■□□□□ 0.41
SOX6P35712 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SOX6P35712 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX6P35712 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX6P35712 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX6P35712 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
SOX6P35712 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX6P35712 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX6P35712 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SOX6P35712 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SOX6P35712 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX6P35712 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SOX6P35712 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SOX6P35712 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SOX6P35712 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX6P35712 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SOX6P35712 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX6P35712 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX6P35712 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.58■□□□□ 0.4
SOX6P35712 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX6P35712 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.58■□□□□ 0.4
SOX6P35712 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SOX6P35712 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.58■□□□□ 0.4
SOX6P35712 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.58■□□□□ 0.4
SOX6P35712 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX6P35712 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SOX6P35712 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SOX6P35712 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SOX6P35712 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.58■□□□□ 0.4
SOX6P35712 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SOX6P35712 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.57■□□□□ 0.4
SOX6P35712 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.57■□□□□ 0.4
SOX6P35712 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 AC135279.3-201ENST00000610945 1311 ntBASIC17.57■□□□□ 0.4
SOX6P35712 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SOX6P35712 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.57■□□□□ 0.4
SOX6P35712 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SOX6P35712 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
SOX6P35712 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.57■□□□□ 0.4
SOX6P35712 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SOX6P35712 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.56■□□□□ 0.4
SOX6P35712 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX6P35712 PBX2P1-201ENST00000493219 1291 ntBASIC17.56■□□□□ 0.4
SOX6P35712 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.56■□□□□ 0.4
SOX6P35712 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX6P35712 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX6P35712 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX6P35712 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SOX6P35712 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.56■□□□□ 0.4
SOX6P35712 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SOX6P35712 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms