Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.25■□□□□ 0.67
VARSP26640 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARSP26640 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARSP26640 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARSP26640 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARSP26640 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
VARSP26640 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARSP26640 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VARSP26640 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARSP26640 GCSHP5-201ENST00000443090 522 ntBASIC19.25■□□□□ 0.67
VARSP26640 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.25■□□□□ 0.67
VARSP26640 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VARSP26640 AC098818.2-201ENST00000564925 2320 ntBASIC19.25■□□□□ 0.67
VARSP26640 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARSP26640 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARSP26640 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VARSP26640 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARSP26640 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VARSP26640 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
VARSP26640 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.24■□□□□ 0.67
VARSP26640 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VARSP26640 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.24■□□□□ 0.67
VARSP26640 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VARSP26640 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.24■□□□□ 0.67
VARSP26640 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.24■□□□□ 0.67
VARSP26640 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARSP26640 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARSP26640 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARSP26640 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
VARSP26640 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.24■□□□□ 0.67
VARSP26640 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VARSP26640 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.24■□□□□ 0.67
VARSP26640 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.24■□□□□ 0.67
VARSP26640 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.24■□□□□ 0.67
VARSP26640 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.24■□□□□ 0.67
VARSP26640 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARSP26640 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARSP26640 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARSP26640 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARSP26640 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.24■□□□□ 0.67
VARSP26640 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.24■□□□□ 0.67
VARSP26640 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VARSP26640 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 AC116562.4-201ENST00000641316 2276 ntBASIC19.23■□□□□ 0.67
VARSP26640 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
VARSP26640 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
VARSP26640 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.23■□□□□ 0.67
VARSP26640 TMEM179-206ENST00000616017 1645 ntBASIC19.23■□□□□ 0.67
VARSP26640 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 HLA-G-202ENST00000376815 851 ntBASIC19.23■□□□□ 0.67
VARSP26640 HLA-G-203ENST00000376818 1127 ntBASIC19.23■□□□□ 0.67
VARSP26640 AC023632.3-201ENST00000521633 145 ntBASIC19.23■□□□□ 0.67
VARSP26640 MYC-209ENST00000641252 345 ntBASIC19.23■□□□□ 0.67
VARSP26640 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.23■□□□□ 0.67
VARSP26640 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
VARSP26640 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
VARSP26640 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
VARSP26640 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.23■□□□□ 0.67
VARSP26640 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.22■□□□□ 0.67
VARSP26640 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.22■□□□□ 0.67
VARSP26640 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.22■□□□□ 0.67
VARSP26640 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.22■□□□□ 0.67
VARSP26640 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
VARSP26640 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.22■□□□□ 0.67
VARSP26640 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VARSP26640 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.22■□□□□ 0.67
VARSP26640 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
VARSP26640 BX323043.1-201ENST00000641006 1765 ntBASIC19.21■□□□□ 0.67
VARSP26640 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
VARSP26640 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
VARSP26640 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms