Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTX3P26022 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTX3P26022 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.84■□□□□ 0.61
PTX3P26022 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.83■□□□□ 0.61
PTX3P26022 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTX3P26022 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.83■□□□□ 0.61
PTX3P26022 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PTX3P26022 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.83■□□□□ 0.61
PTX3P26022 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTX3P26022 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PTX3P26022 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTX3P26022 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTX3P26022 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTX3P26022 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTX3P26022 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.83■□□□□ 0.6
PTX3P26022 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.83■□□□□ 0.6
PTX3P26022 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.83■□□□□ 0.6
PTX3P26022 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTX3P26022 AC120498.8-201ENST00000614275 531 ntBASIC18.83■□□□□ 0.6
PTX3P26022 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.83■□□□□ 0.6
PTX3P26022 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.83■□□□□ 0.6
PTX3P26022 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTX3P26022 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PTX3P26022 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTX3P26022 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTX3P26022 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.83■□□□□ 0.6
PTX3P26022 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTX3P26022 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.83■□□□□ 0.6
PTX3P26022 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PTX3P26022 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PTX3P26022 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTX3P26022 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTX3P26022 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.82■□□□□ 0.6
PTX3P26022 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.82■□□□□ 0.6
PTX3P26022 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTX3P26022 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTX3P26022 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTX3P26022 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PTX3P26022 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTX3P26022 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTX3P26022 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTX3P26022 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTX3P26022 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.82■□□□□ 0.6
PTX3P26022 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.82■□□□□ 0.6
PTX3P26022 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.82■□□□□ 0.6
PTX3P26022 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PTX3P26022 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PTX3P26022 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.82■□□□□ 0.6
PTX3P26022 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTX3P26022 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.82■□□□□ 0.6
PTX3P26022 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
PTX3P26022 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PTX3P26022 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.81■□□□□ 0.6
PTX3P26022 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTX3P26022 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.81■□□□□ 0.6
PTX3P26022 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.81■□□□□ 0.6
PTX3P26022 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.81■□□□□ 0.6
PTX3P26022 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.81■□□□□ 0.6
PTX3P26022 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTX3P26022 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 AIRN-201ENST00000601203 4374 ntBASIC18.81■□□□□ 0.6
PTX3P26022 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.81■□□□□ 0.6
PTX3P26022 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTX3P26022 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PTX3P26022 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.8■□□□□ 0.6
PTX3P26022 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.8■□□□□ 0.6
PTX3P26022 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.8■□□□□ 0.6
PTX3P26022 SOX15-203ENST00000570788 1093 ntBASIC18.8■□□□□ 0.6
PTX3P26022 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.8■□□□□ 0.6
PTX3P26022 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.8■□□□□ 0.6
PTX3P26022 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.8■□□□□ 0.6
PTX3P26022 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PTX3P26022 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PTX3P26022 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.8■□□□□ 0.6
PTX3P26022 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.8■□□□□ 0.6
PTX3P26022 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms