Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CHMP24386 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHMP24386 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CHMP24386 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP24386 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP24386 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP24386 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP24386 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP24386 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP24386 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP24386 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.32■□□□□ 0.52
CHMP24386 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP24386 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP24386 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP24386 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CHMP24386 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP24386 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHMP24386 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.32■□□□□ 0.52
CHMP24386 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.32■□□□□ 0.52
CHMP24386 TMEM191A-211ENST00000637163 1067 ntBASIC18.32■□□□□ 0.52
CHMP24386 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHMP24386 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CHMP24386 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
CHMP24386 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHMP24386 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP24386 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHMP24386 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.31■□□□□ 0.52
CHMP24386 TSPY20P-201ENST00000450910 630 ntBASIC18.31■□□□□ 0.52
CHMP24386 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 AC004408.2-201ENST00000623613 2777 ntBASIC18.31■□□□□ 0.52
CHMP24386 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP24386 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP24386 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.31■□□□□ 0.52
CHMP24386 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.31■□□□□ 0.52
CHMP24386 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.31■□□□□ 0.52
CHMP24386 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHMP24386 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP24386 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP24386 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP24386 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP24386 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP24386 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHMP24386 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP24386 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CHMP24386 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP24386 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP24386 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.3■□□□□ 0.52
CHMP24386 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP24386 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.3■□□□□ 0.52
CHMP24386 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP24386 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP24386 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHMP24386 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CHMP24386 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
CHMP24386 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP24386 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP24386 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.29■□□□□ 0.52
CHMP24386 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.29■□□□□ 0.52
CHMP24386 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CHMP24386 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP24386 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP24386 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.29■□□□□ 0.52
CHMP24386 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHMP24386 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP24386 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.28■□□□□ 0.52
CHMP24386 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP24386 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CHMP24386 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms