Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.65■□□□□ 0.58
MMP11P24347 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
MMP11P24347 KRT16P5-201ENST00000455284 522 ntBASIC18.65■□□□□ 0.58
MMP11P24347 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.65■□□□□ 0.58
MMP11P24347 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.65■□□□□ 0.58
MMP11P24347 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP11P24347 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
MMP11P24347 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP11P24347 KRT17P2-201ENST00000300992 1314 ntBASIC18.65■□□□□ 0.58
MMP11P24347 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.65■□□□□ 0.58
MMP11P24347 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MMP11P24347 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.64■□□□□ 0.58
MMP11P24347 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
MMP11P24347 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.64■□□□□ 0.57
MMP11P24347 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.64■□□□□ 0.57
MMP11P24347 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.64■□□□□ 0.57
MMP11P24347 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP11P24347 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP11P24347 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.64■□□□□ 0.57
MMP11P24347 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP11P24347 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.64■□□□□ 0.57
MMP11P24347 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MMP11P24347 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP11P24347 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.64■□□□□ 0.57
MMP11P24347 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.64■□□□□ 0.57
MMP11P24347 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP11P24347 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.64■□□□□ 0.57
MMP11P24347 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.64■□□□□ 0.57
MMP11P24347 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MMP11P24347 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP11P24347 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MMP11P24347 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MMP11P24347 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.63■□□□□ 0.57
MMP11P24347 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
MMP11P24347 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP11P24347 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.63■□□□□ 0.57
MMP11P24347 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP11P24347 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.63■□□□□ 0.57
MMP11P24347 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.63■□□□□ 0.57
MMP11P24347 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MMP11P24347 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.62■□□□□ 0.57
MMP11P24347 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
MMP11P24347 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.62■□□□□ 0.57
MMP11P24347 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.62■□□□□ 0.57
MMP11P24347 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.62■□□□□ 0.57
MMP11P24347 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.62■□□□□ 0.57
MMP11P24347 AC113410.3-201ENST00000623366 203 ntBASIC18.62■□□□□ 0.57
MMP11P24347 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.62■□□□□ 0.57
MMP11P24347 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.62■□□□□ 0.57
MMP11P24347 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MMP11P24347 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.62■□□□□ 0.57
MMP11P24347 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MMP11P24347 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MMP11P24347 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MMP11P24347 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.61■□□□□ 0.57
MMP11P24347 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MMP11P24347 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms