Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL1P22362 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCL1P22362 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL1P22362 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL1P22362 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL1P22362 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CCL1P22362 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL1P22362 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL1P22362 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL1P22362 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL1P22362 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL1P22362 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL1P22362 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.9■□□□□ 0.3
CCL1P22362 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL1P22362 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL1P22362 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL1P22362 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.9■□□□□ 0.3
CCL1P22362 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL1P22362 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCL1P22362 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL1P22362 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.9■□□□□ 0.3
CCL1P22362 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL1P22362 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL1P22362 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCL1P22362 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.89■□□□□ 0.3
CCL1P22362 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.89■□□□□ 0.29
CCL1P22362 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL1P22362 AC091874.3-201ENST00000512672 1195 ntBASIC16.89■□□□□ 0.29
CCL1P22362 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.89■□□□□ 0.29
CCL1P22362 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.89■□□□□ 0.29
CCL1P22362 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.89■□□□□ 0.29
CCL1P22362 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.89■□□□□ 0.29
CCL1P22362 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCL1P22362 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCL1P22362 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CCL1P22362 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.89■□□□□ 0.29
CCL1P22362 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CCL1P22362 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCL1P22362 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CCL1P22362 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL1P22362 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.88■□□□□ 0.29
CCL1P22362 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 AC083906.2-201ENST00000511578 360 ntBASIC16.88■□□□□ 0.29
CCL1P22362 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.88■□□□□ 0.29
CCL1P22362 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.88■□□□□ 0.29
CCL1P22362 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL1P22362 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.88■□□□□ 0.29
CCL1P22362 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCL1P22362 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCL1P22362 ZNF815P-204ENST00000434898 1737 ntBASIC16.87■□□□□ 0.29
CCL1P22362 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL1P22362 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL1P22362 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL1P22362 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL1P22362 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCL1P22362 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL1P22362 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL1P22362 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL1P22362 GUSBP6-202ENST00000438529 1198 ntBASIC16.87■□□□□ 0.29
CCL1P22362 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCL1P22362 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCL1P22362 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
CCL1P22362 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL1P22362 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.87■□□□□ 0.29
CCL1P22362 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL1P22362 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCL1P22362 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCL1P22362 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCL1P22362 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CCL1P22362 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.86■□□□□ 0.29
CCL1P22362 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms