Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.56■□□□□ 0.72
XRCC1P18887 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
XRCC1P18887 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.56■□□□□ 0.72
XRCC1P18887 AL158047.1-201ENST00000445918 881 ntBASIC19.56■□□□□ 0.72
XRCC1P18887 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC1P18887 AC233263.1-201ENST00000578059 224 ntBASIC19.56■□□□□ 0.72
XRCC1P18887 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.56■□□□□ 0.72
XRCC1P18887 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.56■□□□□ 0.72
XRCC1P18887 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC1P18887 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.56■□□□□ 0.72
XRCC1P18887 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.56■□□□□ 0.72
XRCC1P18887 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC1P18887 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC1P18887 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
XRCC1P18887 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC1P18887 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.55■□□□□ 0.72
XRCC1P18887 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.55■□□□□ 0.72
XRCC1P18887 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.55■□□□□ 0.72
XRCC1P18887 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
XRCC1P18887 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.55■□□□□ 0.72
XRCC1P18887 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC1P18887 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.55■□□□□ 0.72
XRCC1P18887 AL359736.2-201ENST00000621992 437 ntBASIC19.55■□□□□ 0.72
XRCC1P18887 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
XRCC1P18887 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC1P18887 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC1P18887 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
XRCC1P18887 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
XRCC1P18887 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.55■□□□□ 0.72
XRCC1P18887 AP000974.1-201ENST00000623909 2387 ntBASIC19.55■□□□□ 0.72
XRCC1P18887 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.55■□□□□ 0.72
XRCC1P18887 PTBP1P-201ENST00000554374 1601 ntBASIC19.54■□□□□ 0.72
XRCC1P18887 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.54■□□□□ 0.72
XRCC1P18887 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
XRCC1P18887 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
XRCC1P18887 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
XRCC1P18887 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
XRCC1P18887 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.54■□□□□ 0.72
XRCC1P18887 RPPH1-201ENST00000516869 333 ntBASIC19.54■□□□□ 0.72
XRCC1P18887 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.54■□□□□ 0.72
XRCC1P18887 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.54■□□□□ 0.72
XRCC1P18887 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.54■□□□□ 0.72
XRCC1P18887 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.54■□□□□ 0.72
XRCC1P18887 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.54■□□□□ 0.72
XRCC1P18887 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
XRCC1P18887 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
XRCC1P18887 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC1P18887 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC1P18887 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC1P18887 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.53■□□□□ 0.72
XRCC1P18887 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC1P18887 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC1P18887 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC1P18887 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC1P18887 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.53■□□□□ 0.72
XRCC1P18887 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.53■□□□□ 0.72
XRCC1P18887 C1QBPP2-201ENST00000528754 825 ntBASIC19.53■□□□□ 0.72
XRCC1P18887 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.53■□□□□ 0.72
XRCC1P18887 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC1P18887 AP006294.2-201ENST00000641667 209 ntBASIC19.53■□□□□ 0.72
XRCC1P18887 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.53■□□□□ 0.72
XRCC1P18887 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC1P18887 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.53■□□□□ 0.72
XRCC1P18887 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC1P18887 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC1P18887 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
XRCC1P18887 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
XRCC1P18887 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.53■□□□□ 0.72
XRCC1P18887 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.53■□□□□ 0.72
XRCC1P18887 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC1P18887 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC1P18887 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC1P18887 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.52■□□□□ 0.72
XRCC1P18887 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC1P18887 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.52■□□□□ 0.72
XRCC1P18887 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC1P18887 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
XRCC1P18887 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC1P18887 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC1P18887 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
XRCC1P18887 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC1P18887 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
XRCC1P18887 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC1P18887 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC1P18887 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
XRCC1P18887 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms