Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.35■□□□□ 0.85
CD48P09326 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CD48P09326 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.35■□□□□ 0.85
CD48P09326 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.35■□□□□ 0.85
CD48P09326 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CD48P09326 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CD48P09326 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CD48P09326 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD48P09326 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD48P09326 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD48P09326 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD48P09326 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD48P09326 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD48P09326 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CD48P09326 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD48P09326 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.34■□□□□ 0.85
CD48P09326 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.34■□□□□ 0.85
CD48P09326 AC120498.8-201ENST00000614275 531 ntBASIC20.34■□□□□ 0.85
CD48P09326 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.34■□□□□ 0.85
CD48P09326 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CD48P09326 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CD48P09326 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.34■□□□□ 0.85
CD48P09326 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CD48P09326 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.34■□□□□ 0.85
CD48P09326 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CD48P09326 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD48P09326 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD48P09326 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CD48P09326 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.33■□□□□ 0.85
CD48P09326 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD48P09326 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD48P09326 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD48P09326 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CD48P09326 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.33■□□□□ 0.85
CD48P09326 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.33■□□□□ 0.85
CD48P09326 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CD48P09326 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.33■□□□□ 0.85
CD48P09326 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CD48P09326 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.85
CD48P09326 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD48P09326 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CD48P09326 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD48P09326 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD48P09326 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.33■□□□□ 0.84
CD48P09326 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.33■□□□□ 0.84
CD48P09326 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.32■□□□□ 0.84
CD48P09326 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD48P09326 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.31■□□□□ 0.84
CD48P09326 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.31■□□□□ 0.84
CD48P09326 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CD48P09326 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.31■□□□□ 0.84
CD48P09326 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.31■□□□□ 0.84
CD48P09326 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CD48P09326 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CD48P09326 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CD48P09326 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.31■□□□□ 0.84
CD48P09326 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 AC008687.6-201ENST00000596318 630 ntBASIC20.31■□□□□ 0.84
CD48P09326 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.31■□□□□ 0.84
CD48P09326 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.31■□□□□ 0.84
CD48P09326 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD48P09326 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD48P09326 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD48P09326 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD48P09326 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CD48P09326 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CD48P09326 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD48P09326 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD48P09326 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.3■□□□□ 0.84
CD48P09326 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD48P09326 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms