Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CTSDP07339 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.29■□□□□ 0.2
CTSDP07339 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.29■□□□□ 0.2
CTSDP07339 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.29■□□□□ 0.2
CTSDP07339 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTSDP07339 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CTSDP07339 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
CTSDP07339 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CTSDP07339 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.29■□□□□ 0.2
CTSDP07339 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.29■□□□□ 0.2
CTSDP07339 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CTSDP07339 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CTSDP07339 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CTSDP07339 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CTSDP07339 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.28■□□□□ 0.2
CTSDP07339 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.28■□□□□ 0.2
CTSDP07339 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CTSDP07339 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CTSDP07339 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
CTSDP07339 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CTSDP07339 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.28■□□□□ 0.2
CTSDP07339 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 AC020763.4-201ENST00000623414 4170 ntBASIC16.28■□□□□ 0.2
CTSDP07339 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CTSDP07339 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CTSDP07339 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSDP07339 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CTSDP07339 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSDP07339 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.27■□□□□ 0.2
CTSDP07339 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.27■□□□□ 0.2
CTSDP07339 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.27■□□□□ 0.2
CTSDP07339 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.27■□□□□ 0.2
CTSDP07339 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSDP07339 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.27■□□□□ 0.2
CTSDP07339 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CTSDP07339 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSDP07339 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CTSDP07339 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CTSDP07339 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSDP07339 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CTSDP07339 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.27■□□□□ 0.2
CTSDP07339 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.27■□□□□ 0.2
CTSDP07339 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.27■□□□□ 0.2
CTSDP07339 TERF1P2-201ENST00000583350 1212 ntBASIC16.27■□□□□ 0.2
CTSDP07339 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSDP07339 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CTSDP07339 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.27■□□□□ 0.2
CTSDP07339 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSDP07339 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CTSDP07339 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CTSDP07339 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTSDP07339 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTSDP07339 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
CTSDP07339 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTSDP07339 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CTSDP07339 AL161938.1-201ENST00000569833 2180 ntBASIC16.27■□□□□ 0.19
CTSDP07339 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CTSDP07339 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CTSDP07339 PHGDH-210ENST00000641115 1638 ntBASIC16.27■□□□□ 0.19
CTSDP07339 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CTSDP07339 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSDP07339 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSDP07339 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CTSDP07339 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSDP07339 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.26■□□□□ 0.19
CTSDP07339 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.26■□□□□ 0.19
CTSDP07339 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.26■□□□□ 0.19
CTSDP07339 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CTSDP07339 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.26■□□□□ 0.19
CTSDP07339 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.26■□□□□ 0.19
CTSDP07339 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTSDP07339 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms