Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
APPP05067 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
APPP05067 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.55■■□□□ 1.36
APPP05067 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.55■■□□□ 1.36
APPP05067 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
APPP05067 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
APPP05067 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
APPP05067 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
APPP05067 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.55■■□□□ 1.36
APPP05067 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.55■■□□□ 1.36
APPP05067 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
APPP05067 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
APPP05067 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
APPP05067 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
APPP05067 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
APPP05067 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.54■■□□□ 1.36
APPP05067 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
APPP05067 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
APPP05067 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
APPP05067 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.54■■□□□ 1.36
APPP05067 AC004264.1-201ENST00000608354 794 ntBASIC23.54■■□□□ 1.36
APPP05067 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.54■■□□□ 1.36
APPP05067 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
APPP05067 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.54■■□□□ 1.36
APPP05067 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
APPP05067 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.54■■□□□ 1.36
APPP05067 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
APPP05067 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.53■■□□□ 1.36
APPP05067 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APPP05067 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC23.53■■□□□ 1.36
APPP05067 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
APPP05067 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
APPP05067 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APPP05067 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
APPP05067 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.53■■□□□ 1.36
APPP05067 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.53■■□□□ 1.36
APPP05067 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
APPP05067 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC23.53■■□□□ 1.36
APPP05067 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
APPP05067 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APPP05067 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APPP05067 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APPP05067 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APPP05067 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.53■■□□□ 1.36
APPP05067 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.53■■□□□ 1.36
APPP05067 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
APPP05067 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
APPP05067 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.52■■□□□ 1.36
APPP05067 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
APPP05067 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
APPP05067 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
APPP05067 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC23.52■■□□□ 1.36
APPP05067 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
APPP05067 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
APPP05067 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.52■■□□□ 1.36
APPP05067 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
APPP05067 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC23.52■■□□□ 1.36
APPP05067 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.52■■□□□ 1.36
APPP05067 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.52■■□□□ 1.36
APPP05067 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.52■■□□□ 1.36
APPP05067 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.52■■□□□ 1.36
APPP05067 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
APPP05067 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
APPP05067 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.52■■□□□ 1.36
APPP05067 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
APPP05067 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
APPP05067 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
APPP05067 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.51■■□□□ 1.35
APPP05067 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
APPP05067 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
APPP05067 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
APPP05067 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
APPP05067 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.51■■□□□ 1.35
APPP05067 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.51■■□□□ 1.35
APPP05067 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
APPP05067 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
APPP05067 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
APPP05067 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
APPP05067 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
APPP05067 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
APPP05067 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.51■■□□□ 1.35
APPP05067 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
APPP05067 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.51■■□□□ 1.35
APPP05067 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 LBX2-AS1-202ENST00000603175 2083 ntBASIC23.5■■□□□ 1.35
APPP05067 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
APPP05067 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 KRT16P5-201ENST00000455284 522 ntBASIC23.5■■□□□ 1.35
APPP05067 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
APPP05067 AC093827.2-201ENST00000512654 315 ntBASIC23.5■■□□□ 1.35
APPP05067 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.5■■□□□ 1.35
APPP05067 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
APPP05067 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
APPP05067 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC23.5■■□□□ 1.35
APPP05067 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.5■■□□□ 1.35
APPP05067 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms