Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPNS1P04632 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.53■□□□□ 0.72
CAPNS1P04632 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.53■□□□□ 0.72
CAPNS1P04632 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPNS1P04632 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CAPNS1P04632 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPNS1P04632 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CAPNS1P04632 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CAPNS1P04632 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CAPNS1P04632 AC121338.2-201ENST00000622535 1744 ntBASIC19.53■□□□□ 0.72
CAPNS1P04632 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CAPNS1P04632 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CAPNS1P04632 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPNS1P04632 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CAPNS1P04632 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPNS1P04632 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPNS1P04632 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.52■□□□□ 0.72
CAPNS1P04632 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.52■□□□□ 0.72
CAPNS1P04632 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CAPNS1P04632 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.72
CAPNS1P04632 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPNS1P04632 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPNS1P04632 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPNS1P04632 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPNS1P04632 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CAPNS1P04632 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CAPNS1P04632 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.52■□□□□ 0.72
CAPNS1P04632 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.52■□□□□ 0.72
CAPNS1P04632 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.52■□□□□ 0.72
CAPNS1P04632 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
CAPNS1P04632 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.52■□□□□ 0.72
CAPNS1P04632 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPNS1P04632 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CAPNS1P04632 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CAPNS1P04632 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CAPNS1P04632 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CAPNS1P04632 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CAPNS1P04632 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CAPNS1P04632 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
CAPNS1P04632 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CAPNS1P04632 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPNS1P04632 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CAPNS1P04632 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CAPNS1P04632 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CAPNS1P04632 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CAPNS1P04632 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.51■□□□□ 0.71
CAPNS1P04632 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.51■□□□□ 0.71
CAPNS1P04632 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPNS1P04632 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.51■□□□□ 0.71
CAPNS1P04632 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.51■□□□□ 0.71
CAPNS1P04632 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPNS1P04632 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPNS1P04632 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPNS1P04632 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPNS1P04632 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPNS1P04632 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.51■□□□□ 0.71
CAPNS1P04632 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CAPNS1P04632 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CAPNS1P04632 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.51■□□□□ 0.71
CAPNS1P04632 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CAPNS1P04632 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CAPNS1P04632 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPNS1P04632 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CAPNS1P04632 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.5■□□□□ 0.71
CAPNS1P04632 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPNS1P04632 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.5■□□□□ 0.71
CAPNS1P04632 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CAPNS1P04632 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CAPNS1P04632 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CAPNS1P04632 AC113347.1-201ENST00000413321 391 ntBASIC19.5■□□□□ 0.71
CAPNS1P04632 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.5■□□□□ 0.71
CAPNS1P04632 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.5■□□□□ 0.71
CAPNS1P04632 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.5■□□□□ 0.71
CAPNS1P04632 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.5■□□□□ 0.71
CAPNS1P04632 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CAPNS1P04632 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.5■□□□□ 0.71
CAPNS1P04632 KRT8P9-201ENST00000558927 1449 ntBASIC19.5■□□□□ 0.71
CAPNS1P04632 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CAPNS1P04632 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CAPNS1P04632 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.49■□□□□ 0.71
CAPNS1P04632 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CAPNS1P04632 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAPNS1P04632 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPNS1P04632 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPNS1P04632 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPNS1P04632 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPNS1P04632 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPNS1P04632 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAPNS1P04632 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.49■□□□□ 0.71
CAPNS1P04632 NTF6B-201ENST00000591913 560 ntBASIC19.49■□□□□ 0.71
CAPNS1P04632 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.49■□□□□ 0.71
CAPNS1P04632 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CAPNS1P04632 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPNS1P04632 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPNS1P04632 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPNS1P04632 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CAPNS1P04632 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CAPNS1P04632 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CAPNS1P04632 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.48■□□□□ 0.71
CAPNS1P04632 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms