Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFAP04085 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
PDGFAP04085 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
PDGFAP04085 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.34■□□□□ 0.53
PDGFAP04085 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFAP04085 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFAP04085 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFAP04085 TERF1P1-201ENST00000311003 1181 ntBASIC18.34■□□□□ 0.53
PDGFAP04085 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFAP04085 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.34■□□□□ 0.53
PDGFAP04085 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.34■□□□□ 0.53
PDGFAP04085 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDGFAP04085 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
PDGFAP04085 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFAP04085 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFAP04085 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFAP04085 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFAP04085 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PDGFAP04085 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.33■□□□□ 0.53
PDGFAP04085 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFAP04085 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFAP04085 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFAP04085 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFAP04085 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFAP04085 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFAP04085 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFAP04085 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFAP04085 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.33■□□□□ 0.52
PDGFAP04085 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.33■□□□□ 0.52
PDGFAP04085 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.33■□□□□ 0.52
PDGFAP04085 CR392000.1-201ENST00000624770 1228 ntBASIC18.33■□□□□ 0.52
PDGFAP04085 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFAP04085 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
PDGFAP04085 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.33■□□□□ 0.52
PDGFAP04085 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PDGFAP04085 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.33■□□□□ 0.52
PDGFAP04085 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFAP04085 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFAP04085 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.33■□□□□ 0.52
PDGFAP04085 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFAP04085 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.32■□□□□ 0.52
PDGFAP04085 AC073508.3-201ENST00000619697 1419 ntBASIC18.32■□□□□ 0.52
PDGFAP04085 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.32■□□□□ 0.52
PDGFAP04085 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.32■□□□□ 0.52
PDGFAP04085 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.32■□□□□ 0.52
PDGFAP04085 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.32■□□□□ 0.52
PDGFAP04085 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.32■□□□□ 0.52
PDGFAP04085 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.32■□□□□ 0.52
PDGFAP04085 AC116562.2-201ENST00000507042 360 ntBASIC18.32■□□□□ 0.52
PDGFAP04085 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.32■□□□□ 0.52
PDGFAP04085 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.32■□□□□ 0.52
PDGFAP04085 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.32■□□□□ 0.52
PDGFAP04085 FITM1-202ENST00000559294 800 ntBASIC18.32■□□□□ 0.52
PDGFAP04085 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.32■□□□□ 0.52
PDGFAP04085 NAPSB-206ENST00000562112 1266 ntBASIC18.32■□□□□ 0.52
PDGFAP04085 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PDGFAP04085 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.32■□□□□ 0.52
PDGFAP04085 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.32■□□□□ 0.52
PDGFAP04085 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
PDGFAP04085 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.32■□□□□ 0.52
PDGFAP04085 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PDGFAP04085 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFAP04085 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.31■□□□□ 0.52
PDGFAP04085 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFAP04085 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
PDGFAP04085 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFAP04085 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.31■□□□□ 0.52
PDGFAP04085 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFAP04085 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PDGFAP04085 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFAP04085 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFAP04085 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.31■□□□□ 0.52
PDGFAP04085 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.31■□□□□ 0.52
PDGFAP04085 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.31■□□□□ 0.52
PDGFAP04085 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFAP04085 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.31■□□□□ 0.52
PDGFAP04085 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFAP04085 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFAP04085 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.31■□□□□ 0.52
PDGFAP04085 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PDGFAP04085 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFAP04085 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFAP04085 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PDGFAP04085 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.3■□□□□ 0.52
PDGFAP04085 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFAP04085 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFAP04085 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDGFAP04085 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms