Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD9O15198 ABHD17AP1-201ENST00000358206 933 ntBASIC17.79■□□□□ 0.44
SMAD9O15198 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD9O15198 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD9O15198 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD9O15198 POM121L13P-201ENST00000422362 380 ntBASIC17.79■□□□□ 0.44
SMAD9O15198 FAM201B-201ENST00000458407 597 ntBASIC17.79■□□□□ 0.44
SMAD9O15198 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD9O15198 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.79■□□□□ 0.44
SMAD9O15198 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD9O15198 AC006058.3-201ENST00000606217 1069 ntBASIC17.79■□□□□ 0.44
SMAD9O15198 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD9O15198 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD9O15198 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD9O15198 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.79■□□□□ 0.44
SMAD9O15198 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.79■□□□□ 0.44
SMAD9O15198 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD9O15198 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMAD9O15198 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD9O15198 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD9O15198 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD9O15198 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.78■□□□□ 0.44
SMAD9O15198 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.78■□□□□ 0.44
SMAD9O15198 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.78■□□□□ 0.44
SMAD9O15198 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD9O15198 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD9O15198 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.78■□□□□ 0.44
SMAD9O15198 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.78■□□□□ 0.44
SMAD9O15198 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.78■□□□□ 0.44
SMAD9O15198 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.78■□□□□ 0.44
SMAD9O15198 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD9O15198 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD9O15198 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.78■□□□□ 0.44
SMAD9O15198 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.78■□□□□ 0.44
SMAD9O15198 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SMAD9O15198 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
SMAD9O15198 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
SMAD9O15198 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMAD9O15198 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.77■□□□□ 0.44
SMAD9O15198 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.77■□□□□ 0.44
SMAD9O15198 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.77■□□□□ 0.44
SMAD9O15198 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.77■□□□□ 0.44
SMAD9O15198 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMAD9O15198 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SMAD9O15198 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SMAD9O15198 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMAD9O15198 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMAD9O15198 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMAD9O15198 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMAD9O15198 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SMAD9O15198 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SMAD9O15198 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD9O15198 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD9O15198 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD9O15198 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD9O15198 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD9O15198 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SMAD9O15198 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD9O15198 KRT17P3-201ENST00000420566 1262 ntBASIC17.76■□□□□ 0.43
SMAD9O15198 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.76■□□□□ 0.43
SMAD9O15198 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD9O15198 AC233263.1-201ENST00000578059 224 ntBASIC17.76■□□□□ 0.43
SMAD9O15198 AC069544.1-201ENST00000609399 999 ntBASIC17.76■□□□□ 0.43
SMAD9O15198 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD9O15198 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SMAD9O15198 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD9O15198 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD9O15198 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.76■□□□□ 0.43
SMAD9O15198 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SMAD9O15198 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMAD9O15198 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.75■□□□□ 0.43
SMAD9O15198 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
SMAD9O15198 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMAD9O15198 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SMAD9O15198 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.75■□□□□ 0.43
SMAD9O15198 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
SMAD9O15198 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMAD9O15198 AC128676.1-201ENST00000454392 318 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms