Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 AL161938.1-201ENST00000569833 2180 ntBASIC20.41■□□□□ 0.86
CCDC188H7C350 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC188H7C350 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC188H7C350 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CCDC188H7C350 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC188H7C350 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC188H7C350 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC188H7C350 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC188H7C350 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC188H7C350 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
CCDC188H7C350 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC188H7C350 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC188H7C350 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.4■□□□□ 0.86
CCDC188H7C350 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC188H7C350 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC188H7C350 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC188H7C350 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC188H7C350 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC188H7C350 RARRES2P4-201ENST00000514074 484 ntBASIC20.4■□□□□ 0.86
CCDC188H7C350 AC023632.3-201ENST00000521633 145 ntBASIC20.4■□□□□ 0.86
CCDC188H7C350 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC188H7C350 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC188H7C350 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC188H7C350 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC188H7C350 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC188H7C350 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC188H7C350 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC188H7C350 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC188H7C350 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC188H7C350 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC188H7C350 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC188H7C350 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC188H7C350 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC188H7C350 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC188H7C350 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CCDC188H7C350 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC188H7C350 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC188H7C350 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC188H7C350 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC188H7C350 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC188H7C350 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC188H7C350 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC188H7C350 KRT18P68-201ENST00000392293 1000 ntBASIC20.39■□□□□ 0.85
CCDC188H7C350 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.39■□□□□ 0.85
CCDC188H7C350 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC188H7C350 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC188H7C350 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC188H7C350 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CCDC188H7C350 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CCDC188H7C350 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC188H7C350 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC188H7C350 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC188H7C350 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC188H7C350 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC188H7C350 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC188H7C350 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC188H7C350 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.38■□□□□ 0.85
CCDC188H7C350 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CCDC188H7C350 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC188H7C350 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC188H7C350 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC188H7C350 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC188H7C350 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC188H7C350 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC188H7C350 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC188H7C350 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC188H7C350 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC188H7C350 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
CCDC188H7C350 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC188H7C350 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC188H7C350 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC188H7C350 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC188H7C350 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC188H7C350 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC188H7C350 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC188H7C350 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CCDC188H7C350 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC188H7C350 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC188H7C350 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC188H7C350 AC141586.3-201ENST00000562166 1838 ntBASIC20.37■□□□□ 0.85
CCDC188H7C350 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC188H7C350 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC188H7C350 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.37■□□□□ 0.85
CCDC188H7C350 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC188H7C350 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC188H7C350 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC188H7C350 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC188H7C350 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC188H7C350 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC188H7C350 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC188H7C350 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC188H7C350 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC188H7C350 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC188H7C350 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC188H7C350 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms