Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NPIPA3F8WFD2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
NPIPA3F8WFD2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.89■□□□□ 0.46
NPIPA3F8WFD2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
NPIPA3F8WFD2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.89■□□□□ 0.46
NPIPA3F8WFD2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
NPIPA3F8WFD2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.89■□□□□ 0.45
NPIPA3F8WFD2 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 AF186192.3-201ENST00000583427 947 ntBASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
NPIPA3F8WFD2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 AL162377.1-201ENST00000618844 1793 ntBASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 AL353807.1-201ENST00000427475 662 ntBASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 TSPY15P-201ENST00000457163 923 ntBASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
NPIPA3F8WFD2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA3F8WFD2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA3F8WFD2 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA3F8WFD2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA3F8WFD2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NPIPA3F8WFD2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA3F8WFD2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA3F8WFD2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
NPIPA3F8WFD2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA3F8WFD2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NPIPA3F8WFD2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms