Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINC01548A6NM66 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
LINC01548A6NM66 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.52■□□□□ 0.08
LINC01548A6NM66 USP36-216ENST00000589424 970 ntTSL 5 BASIC15.52■□□□□ 0.08
LINC01548A6NM66 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.52■□□□□ 0.08
LINC01548A6NM66 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01548A6NM66 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01548A6NM66 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.52■□□□□ 0.07
LINC01548A6NM66 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01548A6NM66 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01548A6NM66 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
LINC01548A6NM66 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01548A6NM66 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
LINC01548A6NM66 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LINC01548A6NM66 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.52■□□□□ 0.07
LINC01548A6NM66 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.52■□□□□ 0.07
LINC01548A6NM66 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01548A6NM66 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01548A6NM66 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC01548A6NM66 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.51■□□□□ 0.07
LINC01548A6NM66 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 AC009237.14-201ENST00000609975 1594 ntBASIC15.51■□□□□ 0.07
LINC01548A6NM66 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 Z99916.2-201ENST00000604037 246 ntBASIC15.51■□□□□ 0.07
LINC01548A6NM66 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC01548A6NM66 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC01548A6NM66 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
LINC01548A6NM66 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.5■□□□□ 0.07
LINC01548A6NM66 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.5■□□□□ 0.07
LINC01548A6NM66 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.5■□□□□ 0.07
LINC01548A6NM66 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
LINC01548A6NM66 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 KRT16P5-201ENST00000455284 522 ntBASIC15.49■□□□□ 0.07
LINC01548A6NM66 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 AC093827.2-201ENST00000512654 315 ntBASIC15.49■□□□□ 0.07
LINC01548A6NM66 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 CABP2-204ENST00000636477 941 ntTSL 5 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
LINC01548A6NM66 TMEM179-206ENST00000616017 1645 ntBASIC15.49■□□□□ 0.07
LINC01548A6NM66 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
LINC01548A6NM66 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms