Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 AL161938.1-201ENST00000569833 2180 ntBASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRBV27A0A0K0K1C4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 KRT19P1-201ENST00000405746 1186 ntBASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 AC142381.2-201ENST00000566120 298 ntBASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 AC004854.2-201ENST00000608450 1441 ntBASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.87□□□□□ -0.19
TRBV27A0A0K0K1C4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 LETM1P2-201ENST00000597330 2178 ntBASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 AC100791.3-201ENST00000617619 330 ntBASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.86□□□□□ -0.19
TRBV27A0A0K0K1C4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 AC026471.1-201ENST00000564629 3026 ntBASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 AC141586.3-201ENST00000562166 1838 ntBASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRBV27A0A0K0K1C4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms